Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4328g00003 ATGAGAGAAACACTAGAGAGATCAAATCCGAATTCAAAAGAACAAGAAATTCTCAAAAAATGTGTCACTTTCTGCACCAACTACAGTTTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTCATTACCTCAATAGACAGTTGAATGAACCAGTTGTAGAGAGTACCGAAATTGATGGCTTTCTGTTGCAGCTGCAAAATGATAAGAAAGAGGACAGTGTAAAAGAAAGGGAAGAAGGTGACTTGCATATGTACTCTATCGGAGATGTAGAAATGCAGGTAAATAATGATGATGATACAAAGGACGATACTCCTGGAACTCCAATCAATCACCATAATGATCTTTTATCTCCTGATCCAACATCATTAACTGATCCAACATCATTAACTGATCCAACATCATTAATGGATGAGAATGTTTTATCTTCTGCGAAAGCATCAAAATCAAAAACTAATAACACCCTTTTCAAAGCAAATAGATAA 483 0.3644 MRETLERSNPNSKEQEILKKCVTFCTNYSFTPSDLVSSWEVHYLNRQLNEPVVESTEIDGFLLQLQNDKKEDSVKEREEGDLHMYSIGDVEMQVNNDDDTKDDTPGTPINHHNDLLSPDPTSLTDPTSLTDPTSLMDENVLSSAKASKSKTNNTLFKANR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4328g00003 160 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 12 147 IPR016722 -
Vium4328g00003 160 MobiDBLite consensus disorder prediction 110 134 - -
Vium4328g00003 160 MobiDBLite consensus disorder prediction 141 160 - -
Vium4328g00003 160 MobiDBLite consensus disorder prediction 93 134 - -
Vium4328g00003 160 MobiDBLite consensus disorder prediction 94 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4328g00003 Vium-Chr4328 23906 25858 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4328g00003 13 120 Core DNA Replication Machinery Family AT1G67630 49.074 1.42e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4328g00003 K02321 - vum:124837689 313.923