Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4327g00005 ATGGAAAAGCAACTAGCATTCACAGGGATATTAAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAGACGAGGCTGCACAGCTTCAATTCCGAGGACAAAAAATCTGGCAAGCTGCAATGGAGGAATTATTGTCAAAGGGGATGAAGAAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCTGGTGGTCTAGCGTCTATAATACATTGTGATGAGTTCCGGACCTTATTTCCTACATCCACCAAAGTGAAATGTTTGAGCGATGCAGGGTTTTTCCTAGATGCGGTTGATGTTGCTGGGGTTCGGACAATGAGGAATCTGTTTGGAGGTGTAGTTAAGTTACAGGAAGTGCAAAAAAATCTTCCAGAAAGTTGTCTCAAGCAATTGGACCCAACTTCGTGCTTTTTTCCTCAAAATTTGATCAACCATGTTCAGACTCCATTGTTTCTACTCAATGCAGCTTATGATTCATGGCAGGTCCAAGACAGTTTGGTCTCTGGTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAACATAATCGTGCACTCTGTAACTCATCTCAAATTCAATTCTTCCAAGATTTCAGAAATCAAATGCTAAACTACATCAAAGGCTTCTCAGGGGAATCTCGTACCGGGTTATTCATCAATTCTTGTTTTGCTCATTGCCACTCTGAATTACAAGATACTTGGTTTGCTGATGACTCTCCAGTTATTGGCAATACGCCAGTTGCAACTGCTGTTGGACAATGGTATTTTGATCGGAAAACTGTCAAAGCTATAGACTGTCCTTACCCCTGTGGCAAGACCTGCCATAATACGGTCTTCAAGTGA 897 0.4247 MEKQLAFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQDEAAQLQFRGQKIWQAAMEELLSKGMKKANQALLSGCSAGGLASIIHCDEFRTLFPTSTKVKCLSDAGFFLDAVDVAGVRTMRNLFGGVVKLQEVQKNLPESCLKQLDPTSCFFPQNLINHVQTPLFLLNAAYDSWQVQDSLVSGSADPHGSWNDCKHNRALCNSSQIQFFQDFRNQMLNYIKGFSGESRTGLFINSCFAHCHSELQDTWFADDSPVIGNTPVATAVGQWYFDRKTVKAIDCPYPCGKTCHNTVFK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4327g00005 298 PANTHER NOTUM-RELATED 1 294 IPR004963 GO:0016787
Vium4327g00005 298 Pfam Pectinacetylesterase 1 278 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4327g00005 Vium-Chr4327 29361 32634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4327g00005 1 298 Carbohydrate Esterase AT2G46930 68.792 5.69e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4327g00005 K19882 - gmx:100785270 544.658