Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium4288g00012 | ATGGAGTCTCTAGGGCTAGCTGGGGTTCTTGTTGCCTTCTCGGCTGCACTTTGCCTCTTCTTGCTCTTCATACTAACTTTTTCTTGGTGGGTTCTCCCTAACCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGTCCAATCCCAAGTTTTCCTCTTGGAAACATTAAAGAGATGAAAACAAAGAATAACATTCAATCTTCAGTTGCATCCTCAAATCTCACTCATGATATACACTCTAACGTTTTCCCCTACTTTTCTAGCTGGCAGAAATCACATGGTAAAGTTTTTGTGTACTGGTTGGGCACGGAGCCATTCCTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCGACAGTGGTGGTGGCCAAGCGATGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCAACGAATGGGTTCGTCACAGGCACATTGTTGCCCCTGCCTTCAATCCCATTAACTTGAAGGACATGGCGAACATGATGGTTGATTCCACGAATCAAATGATAGACAGATGGTTTACCCGAATAAACTCTGGGAACCCCGAAATCGACGTGGAGAGAGAGATTATAGCAACGGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGATGAGAATGCGAGAGATGTTTTCGACAAATTAAGAGCCTTGCAAATGACCCTTTTTAAGACCAATCGATACGTAGGTGTTCCCTTTGGGAAGTATTTCAACGTAAAGAAAACATTAGAGGCGAAGAAACTCGGGAAAGAAATCGACGAACTGTTGTTGTCGATCATAGAATCTCGGAAGAAGTCGGGGACGAAAAATGGTCAGCAAGATCTGTTAGGTCTGTTGCTGCAAGAAAATCACGAGGTCGATGGAAGGTCGGGTAAGACGTTAACATCGCGAGAAGTTGTTGACGAATGCAAGACCTTCTTCTTCGGAGGGCATGAAACCACAGCACTTGCCATCACGTGGACCTTGCTGCTTCTGGCCATGCACCCAGATTGGCAAACCCAGTTGAGAGACGAGATACGAGAGGTGGTGGGGAACTCTGAACAACTTGATATTTCTATGCTCTCTGGTTTAAAAAAGATGAAATGGGTTATGAATGAAGTTCTAAGACTGTACCCACCAGCACCAAACGTGCAGAGGCAAGCAAGAGAAGACATAAAAGTGGATGATGTAACGGTGGCCGATGGAACGAACATGTGGATAGATGTGGTGGCCATGCACCATGACCCTGAACTATGGGGAGAGGATGCGAACGAGTTCAGGCCAGAGAGGTTCATGAATGATGTGAACGGTGGATGCAAGCACAAGATGGGTTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGAAATCTTACCTTTATGGAGTACAAGATCGTTTTAACCCTTCTTCTCTCTAGGTTCACTTTCAAGACTTCACCTGCTTACAATCACTCACCGTCTATTATGCTCTCCCTAAGGCCTAGCTATGGTCTTCCACTCATTGTTCATCCACTTTAA | 1554 | 0.4517 | MESLGLAGVLVAFSAALCLFLLFILTFSWWVLPNQTLKKLKKCGLGGPIPSFPLGNIKEMKTKNNIQSSVASSNLTHDIHSNVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVVAKRWGKPSVFRTDRDPMFGSGLVMVEGNEWVRHRHIVAPAFNPINLKDMANMMVDSTNQMIDRWFTRINSGNPEIDVEREIIATAGEIIARTSFGMKDENARDVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIESRKKSGTKNGQQDLLGLLLQENHEVDGRSGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHPDWQTQLRDEIREVVGNSEQLDISMLSGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDVTVADGTNMWIDVVAMHHDPELWGEDANEFRPERFMNDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKTSPAYNHSPSIMLSLRPSYGLPLIVHPL | 517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium4288g00012 | 517 | Pfam | Cytochrome P450 | 80 | 497 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506|GO:0016705 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | Gene3D | Cytochrome P450 | 30 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Vium4288g00012 | 517 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 22 | 509 | - | - | |
Vium4288g00012 | 517 | SUPERFAMILY | Cytochrome P450 | 77 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium4288g00012 | Vium-Chr4288 | 133815 | 136215 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium4288g00012 | 12 | 517 | Cytochrome P450 | AT5G52400 | 59.766 | 0.0 | 643 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium4288g00012 | - | - | gmx:100785284 | 924.85 |