Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4285g00007 ATGGCGCAAAGTGAGAGAGAAGTTGATGGGATTTTGGGTTCAAAGAAAACAGTTCGTGTTGAAAATGATTTGACAAATGGAATTTCTGTGTTTCTTCATTGCAAATCGAGGGATGATGATCTTGGAGAACATGTTCTTGAGAATGGACAGTATCAAGAATGGCGTTTCAGAAATAACATTGTTCACAGCACTCTTTTCTGGTGTACCATGCGAGCATCCAATGTTCAAAGCAGTTTTGATGTTTATAGTTACAAAGCTGACAATGCTGTGTGTGACCAATGTAACAGAAGTTTGAGAAATGATGGATTGTATTTCTATAATCAGTTCGAAAACAAATGGGAGAAGAAACTCTCATGGAATATCCAAGCTTCCTGA 375 0.376 MAQSEREVDGILGSKKTVRVENDLTNGISVFLHCKSRDDDLGEHVLENGQYQEWRFRNNIVHSTLFWCTMRASNVQSSFDVYSYKADNAVCDQCNRSLRNDGLYFYNQFENKWEKKLSWNIQAS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4285g00007 124 Pfam Plant self-incompatibility protein S1 17 119 IPR010264 -
Vium4285g00007 124 PANTHER - 14 112 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4285g00007 Vium-Chr4285 61204 61578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4285g00007 4 123 Carbohydrate Esterase AT3G16970 28.226 2.63e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4285g00007 - - pvu:PHAVU_010G083600g 204.527