Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4284g00029 ATGGGGAAGTACATGAAGAAGGCGAAGCCAAAGGGAGAGCTGGCGCTTGTGGAATCCACCACCACCAACGCCACCACCTCCTACATGGGAGTTCGAACCCGCGCCAAAACCCTAGCGCTTCAGAAATCACACCCTCAGCCCGAACTAGCTCCCTCATCCGATTCCTACCTCCAGCTCCGGAGTCGTCGCCTCCAGAAGCCTCCGATTTTGCTTCACTCTCCCAGGCGGAACAAACACCCGAACCCTAAATCACCAATCCCTGAACCTGCCAGGCTCGGACTCGCTTCGGAGCACGACGCTGCGCTCACAGCGCGCAGCCACAAGGAGGAGAGTGCTTTGCATGAGAATGCTGAGGTGCAGGAAGCGTCGTTTGGGGAGAATGTTTTGGATTTTGAAGGTAGAGATAGAAGCACTCGAGAATCCACACCTTGCAGTTTGATAAGGGACCCTGATACTGTCAGAACACCCGGTTCAACTACCAGGCCTACTTGCTCAACTGATGCTAATCGAAGAACCGAGCATGCAAATAGAAGGCAAATCCCAACTTCACGCGAAATGGATGAATTCTTTGCTGAAGTTGAAGAGGCCCAGCAAAGGAAGTTCATTGAGAAATACAACTTTGATCCTGTGAATGAGAAGCCACTCCCAGGGCGTTTTGAATGGGAAAAGTTGAAACCCTAG 681 0.5213 MGKYMKKAKPKGELALVESTTTNATTSYMGVRTRAKTLALQKSHPQPELAPSSDSYLQLRSRRLQKPPILLHSPRRNKHPNPKSPIPEPARLGLASEHDAALTARSHKEESALHENAEVQEASFGENVLDFEGRDRSTRESTPCSLIRDPDTVRTPGSTTRPTCSTDANRRTEHANRRQIPTSREMDEFFAEVEEAQQRKFIEKYNFDPVNEKPLPGRFEWEKLKP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4284g00029 226 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 225 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4284g00029 226 MobiDBLite consensus disorder prediction 152 166 - -
Vium4284g00029 226 MobiDBLite consensus disorder prediction 128 142 - -
Vium4284g00029 226 Pfam Cyclin-dependent kinase inhibitor 180 224 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vium4284g00029 226 MobiDBLite consensus disorder prediction 101 116 - -
Vium4284g00029 226 MobiDBLite consensus disorder prediction 40 185 - -
Vium4284g00029 226 MobiDBLite consensus disorder prediction 167 185 - -
Vium4284g00029 226 PIRSF CKI_KRP_plant 1 226 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4284g00029 226 Gene3D p27 170 226 IPR044898 -
Vium4284g00029 226 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4284g00029 Vium-Chr4284 180271 182999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4284g00029 1 226 Core Cell Cycle Gene Families AT5G48820 41.897 1.43e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4284g00029 - - gmx:100781000 387.882