Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4284g00004 ATGGGAGAGGTGAAGCTACATGGGTTTTGGTACAGTCCGTTCGCATTGAGGGTGAATTGGAGCTTAAAGCTGAAAGGTATTGAGTATGAGAACATCGAAGAGGATCGATTCAACAAAACTCCTCAACTGCTTCAGTACAATCCTGTCTACAAGAGAATCCCCGTTCTCGTTCATGCTGGAAAACCCATTTCTGAATCCATGCTCATAATCGAATACATCGATCAGGTTTGGCCTCAACATCCACTCTTACCTTCTCATCCCTACCACAGAGCTCTCGCACGCTTTTGGGTCAAATACTCTGATGATCTGACCGAGGGAGTTAGAGCACTCTATCGTAGCAAAAATGTGGAAGAGAGAAAGAAGGCCATAGAGCATATTTTGGAGCATTTGAGAGTTGTGGAAGATCAGTGTTTTGGTAAGGAAAACAAATTCTTTGGAGGAGAGAGTGTTAATGTTGTGGACTTGGCTTTTGGGTCCATCATCAAATATATTACTGTGTTGGAAGATATCTTTGAAGAGCAAATTCTTGAAGCACAGAAATTCCCTCGTTTGTATTCATGGTTTAATATCTTCAAATCTGAACCAATCATCGCAGAAATCCTACCTGACCAGGATCAAATGGTAGCTTTTGTTAAACCTCTTAGAGAACAAATTCTGGCATCTTCGTGA 669 0.4155 MGEVKLHGFWYSPFALRVNWSLKLKGIEYENIEEDRFNKTPQLLQYNPVYKRIPVLVHAGKPISESMLIIEYIDQVWPQHPLLPSHPYHRALARFWVKYSDDLTEGVRALYRSKNVEERKKAIEHILEHLRVVEDQCFGKENKFFGGESVNVVDLAFGSIIKYITVLEDIFEEQILEAQKFPRLYSWFNIFKSEPIIAEILPDQDQMVAFVKPLREQILASS 222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium4284g00004 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Vium4284g00004 222 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Vium4284g00004 222 CDD GST_N_Tau 4 77 - -
Vium4284g00004 222 Pfam Glutathione S-transferase, C-terminal domain 113 194 IPR004046 -
Vium4284g00004 222 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Vium4284g00004 222 Gene3D Glutaredoxin 1 82 - -
Vium4284g00004 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vium4284g00004 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vium4284g00004 222 Gene3D - 83 221 - -
Vium4284g00004 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vium4284g00004 222 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Vium4284g00004 222 FunFam Tau class glutathione S-transferase 1 85 - -
Vium4284g00004 222 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vium4284g00004 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium4284g00004 Vium-Chr4284 21396 22357 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4284g00004 3 218 Glutathione S-transferase Gene Family AT2G29420 37.963 6.64e-52 166
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4284g00004 K00799 - gmx:547584 293.893