Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4278g00005 ATGAACAGAGGTGTCTTGCAAAGCTCACCGGTGCAACAAATGATGGCTGCAAACCCTAACAATTGGTGGAACATCAACACCATGCGCCCTCCTCCGCCTTCTCCTCCTCCTCCTTCTCAGCCTTCTTCTCCGTTCTTCTCCACTCCTTCCAACTTTCTAACTCCGTATAATACCTCTTCATCTCTTCCTCTTCCTTCTTGGCATGATAACAATCAAGAACTACCTGAGTCATGGAGCCAGCTTCTCATGAGTGGGATGGTGTCTGAAGAAGAGAAAGGGGCTATGTGCCAGGTTCAGCAACAAATGCTGAGTCAGGCTTCAAGGGTTCCTATTGTTGATGTTAAGCAAGAAGGCTCGGTGAACAGCTACGTGTACGGTCATGGAAACGAAGAGTTTCACCCAGCAAAGCCAACTTGGCCTCAAATAGTGCCTTCTTCTTCCCCAAAATCATGTGTAACAAGTTTCAGCAGCAGCATGTTAGATTTCTCTAACAGTAACACAGATGCTAGGCCTCCTCCTCCAGACCCATCATCAGAGTGTAATAGCACTGCAGCTGGTGGGGCAATCAAGAAAGCTAGGGTTCAACCGCCCACAACGCAGACGACCTTCAAGGTATTTTTCATCCAATGA 630 0.4778 MNRGVLQSSPVQQMMAANPNNWWNINTMRPPPPSPPPPSQPSSPFFSTPSNFLTPYNTSSSLPLPSWHDNNQELPESWSQLLMSGMVSEEEKGAMCQVQQQMLSQASRVPIVDVKQEGSVNSYVYGHGNEEFHPAKPTWPQIVPSSSPKSCVTSFSSSMLDFSNSNTDARPPPPDPSSECNSTAAGGAIKKARVQPPTTQTTFKVFFIQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4278g00005 209 MobiDBLite consensus disorder prediction 21 52 - -
Vium4278g00005 209 MobiDBLite consensus disorder prediction 26 44 - -
Vium4278g00005 209 MobiDBLite consensus disorder prediction 161 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4278g00005 Vium-Chr4278 56688 58317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4278g00005 1 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 34.296 7.14e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4278g00005 - - vum:124837378 390.578