Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4278g00004 ATGAACAGAGGTGTCTTGCAAAGCTCACCGGTGCAACAAATGATGGCTGCAAACCCTAACAATTGGTGGAACATCAACACCATGCGCCCTCCTCCGCCTTCTCCTCCTCCTCCTTCTCAGCCTTCTTCTCCGTTCTTCTCCACTCCTTCCAACTTTCTAACTCCGTATAATACCTCTTCATCTCTTCCTCTTCCTTCTTGGCATGATAACAATCAAGAACTACCTGAGTCATGGAGCCAGCTTCTCATGAGTGGGATGGTGTCTGAAGAAGAGAAAGGGGCTATGTGCCAGGTTCAGCAACAAATGCTGAGTCAGGCTTCAAGGGTTCCTATTGTTGATGTTAAGCAAGAAGGCTCGGTGAACAGCTACGTGTACGGTCATGGAAACGAAGAGTTTCACCCAGCAAAGCCAACTTGGCCTCAAATAGTGCCTTCTTCTTCCCCTAAATCATGTGTAACAAGTTTCAGCAGCAGCATGTTAGATTTCTCTAACAGTAACACAGATGCTAGGCCTCCTCCTCCAGACCCATCATCAGAGGTATATATTATATTACTGATACATGTTATTTAA 570 0.4579 MNRGVLQSSPVQQMMAANPNNWWNINTMRPPPPSPPPPSQPSSPFFSTPSNFLTPYNTSSSLPLPSWHDNNQELPESWSQLLMSGMVSEEEKGAMCQVQQQMLSQASRVPIVDVKQEGSVNSYVYGHGNEEFHPAKPTWPQIVPSSSPKSCVTSFSSSMLDFSNSNTDARPPPPDPSSEVYIILLIHVI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4278g00004 189 MobiDBLite consensus disorder prediction 26 44 - -
Vium4278g00004 189 MobiDBLite consensus disorder prediction 21 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4278g00004 Vium-Chr4278 54196 55276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4278g00004 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 32.000 2.63e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4278g00004 - - vum:124837378 330.872