Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4277g00003 ATGTCAACTTCTCTGCGTGAAAACTCTTCAATCTGGTTTTTCCTTCCAATCGCTACCTTAATCATCTTCTTTTTACGGACTGTCATCAAATGCAGTCATAATTTCAATTCTGCAATGGCCAGAAAAACCTTACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGCACTCTCCATTCCTTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTTGTCTCAACGGCCGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTACGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATTTGTGTCTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTCGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGATAAGATTAAGCAGTGTTGTTGTTCTGTGACGCCTGTGAATTTAACTGATTTATTTTCTACCGTCACAAATGACATAGTGTGCAGAGCTGCTATCGGAAGGAGATACAGCAGAGGAGAAGGGAGTAAGTTTTGGGAGCCAATGAATGAGATGATGAAACTGTTGGGTGCTCCAGTTATAGGGGATTGTATACCTTGGCTTGATTGGGTAGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAGATTGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAGTAGAAGAGGGCATGATGTGCATGGTGATGATGACGACGAACATAATGATTTGGTGGACATTTTGCTGAGGATCCAAAAGACAAACGCCTTGGATTTCCAGATTGATAAAACAGTCATAAAGGCTATAATCCTGGTACGTAAGATTCATACAATGTGA 960 0.4156 MSTSLRENSSIWFFLPIATLIIFFLRTVIKCSHNFNSAMARKTLPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDIFLYDSKDVASAPYGNYWRQIRSICVLHLLSAKKVQSFGAVREEEISIMMDKIKQCCCSVTPVNLTDLFSTVTNDIVCRAAIGRRYSRGEGSKFWEPMNEMMKLLGAPVIGDCIPWLDWVGRVNGMYGRAKRLAKQLDEFFDEVVDEHVSRRGHDVHGDDDDEHNDLVDILLRIQKTNALDFQIDKTVIKAIILVRKIHTM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4277g00003 319 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4277g00003 319 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4277g00003 319 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4277g00003 319 Pfam Cytochrome P450 45 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4277g00003 319 Gene3D Cytochrome P450 32 313 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4277g00003 319 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 21 312 - -
Vium4277g00003 319 SUPERFAMILY Cytochrome P450 45 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4277g00003 Vium-Chr4277 44941 46276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4277g00003 41 312 Cytochrome P450 AT3G48270 50.735 4.19e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4277g00003 - - gmx:100806940 452.595