Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4267g00009 ATGAAAACACCAGAAAATAATGGTCATTCGAAGGAAGAAAGATATGGCTCTTTGATGAAAGATGGGGCCACTTCCCCCGTTAGGCCAGTGTTTAAGCGACGTAAAGTTTCCGCCATTCGGGATTTCCCTGATGGGTGTGGACCATCTGCTTCAAAGATTGATGAAGTATCAAATATAAATACTGCAGGTTGTGGTTCTGTTAATGGTACAATTGTTGAGGTTAAGAATGGTGAACATTTAGTGGGTGTGAAAACTTCCACATGTGAAAATGATGGTTGGCATTCTGAGGTGAAAGGTTTTCGTTTCACCGAGACTCATGTCCCAACAGCTGACAGTGGTTTGGATAAGGACAACCCCATGGTCTCATCTTATCATGTGGATGGATCTACTGCTGAAGATAAAACGGGAATAGTGACTATTAGCCAAATCAATGATTGTGGATCTACTGCTGAAGATAAACCGGGGGTAGTAGTGACTAATAGCCAAAGCACTGATCTTGGTTTGAACGAGGAAAGCCCTGTAGACACATCTCATAGAGTGGATGAACATAATGCCGAAGATGAAGCTGCAAAAGTGACTCTTGGGCGAACAACTGATTGTGGTGTGAATCAGGAAATCCCTGTGGTCTCATCTCATCAAGTGGACGGGTCTACTCGAGAAGATAACCCTGCAAAAGTGATGCTTGCTCAAACAGAGGACTGCAGTTTGAATCTGGAAAACCATGAGGTCTCATCACATCAAGTGAATGGGCCCATCACAGAAGATAAACTGGCAAAAGTGACTGGTGAGCGAACAACTGACTGTGGTTTGAATAAGGAAAACCCTGCGGTCTCATCTCATCTAGTGGATGGCCCTGCTGCCGAAGATAAACCTGCAGAAGTGCCTTTAATGGACCAGGAAACTTTGAATACAGAGTTTTCAAGAACTGCAAACACTGGAAAATGTAACTCCTCATATATGTTGGAGTCGTCTTCACCAGTGGGTGAGATGGCTGTGCCGGATGGTTCAAAACACTTATCCATTGATAAAACATCAGCTTCCAGTGCTTGTATGGTGGAGCCTATAACTAGAAGGTACCTTCCGCAAAGAAAAGTTTCAGCTGTTAGAAACTTCCCTCCTTTATGTGGACGTAGTGCTCCACGTCTCGGTAAGGACAAACATGTGTGTCTAGAGGGGACCTCTTCTTTGAACAACAAGACAAAAGGTCAACAAAACCTGGCTGTAGATGACAATCCATTGAAAAAAGTAGCAGCTACTGATGTAAAAGAAGGTAAAAGTAATATTCAGGATGAATATAATTGCAACAGGAAGCTTGTTGACATCGATCAACTTGATTCTGAAAGAAATTCTGCAGAGAGATTGAAAAAGCTGCGTGCATGTGAACCATCGTCTGAGATGAAAAAGTCAACTGAAAATGAGAGAGAAAAGTATGCTACACCCCCTGAAACAAGTAATCACCATCAGATCAAAATAAATTCTAAGGCGGTGGTAAAAGAGAAAAATAGGGATGAGACAAAGCCTTCGTGGATATCTCAATCTAAGCATAAATTGAAAGGGAATTTTAATAGACTGCAGGTCACATCACAGAGGAAAGTAATACTAGGTTTGATGGCTGATTCAGAATGTCCGTGGAGGTCTGATAAAGGTACCTCCAAATTTAAGTTGGGTGCTGGTAATAGTAAAGGCAAGAGAAAGAAAGGTGATTCTTTTGCATTGCCTGATAGGTCTAGAACAGAGTATAGTGGTTTGTTGAATGATTCTGAGAAGAAACCTTTGAAAAAGAAAAAGGGAAATCCTGCTTCTGTAGGTATGGGTGAATTAGTACTTTGGGAAAAGGAGGATTATCTTAACCCTAATGAAAATGATGACACTCTTCAAATTGTTCTGAGATCAAATGAGTTTGATGTAAACCTTACTCCCTCTTCTCATTCGAATTTCACTGGTGATGAGAATGACCCAAATGTGACCCGAAAAAAAGTGAGGGAAACATTACGGTTGTTTCAAGTTATTTGTAGAAAGCTTTTACAGGAAGTAGAATCAAAGTTAAATGAGCGAGCAAATAATAAGAGAGTTGATTTAGTTGCTTCAAAGATCCTTAAGGAGAATGGGAAATATGTCAACACAGGCAAACAAATACTAGGCTGTGTCCCTGGTGTCGAAGTCGGTGATGAATTTCAATATAGAGTGGAGCTTAATATAGTTGGCCTTCATCGTCCAATTCAAGGTGGCATAGATTATGTGCGACACAACGGTAAGATCCTTGCAACCAGTATTGTTGCATCAGGGGGCTATGCTGACGATTTGGATAATTCGGATGTATTGACATATACAGGACAGGGTGGAAATGTGATGAACAGTGATAAGGAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGATGAACAGTAGTATTGAAAAGAATCCTGTTAGAGTAATTCGTGGCTCTGAGTCAATGGATGGAAAATGCAGGACTTATGTTTATGATGGGGTGTATGTAGTTGAGGCAGGTTGGGATGAACACGGACCACACGGGAAGAAAATTTTTAAATTTCGACTGCAAAGAGAACCTGGTCAACCAGAGCTTCCTTTGAGAGTAGTGAAGAAATCTAAAAAGTTCAAAACGAGAGAAGGTGTATGTGTTGCTGATATTTCTTTTGGAAAAGAACGAATTCCAATATGCGCTGTGAACACCATAGATGATGAAAAACCTCCTCCATTTAATTACATAACTAGCATGATATACCCCAAATTCCATCTCCTTCCTGCCGAAGGATGTGATTGTATTAGTGGATGCTCAGATTTGGAAAAATGTTAG 2823 0.4091 MKTPENNGHSKEERYGSLMKDGATSPVRPVFKRRKVSAIRDFPDGCGPSASKIDEVSNINTAGCGSVNGTIVEVKNGEHLVGVKTSTCENDGWHSEVKGFRFTETHVPTADSGLDKDNPMVSSYHVDGSTAEDKTGIVTISQINDCGSTAEDKPGVVVTNSQSTDLGLNEESPVDTSHRVDEHNAEDEAAKVTLGRTTDCGVNQEIPVVSSHQVDGSTREDNPAKVMLAQTEDCSLNLENHEVSSHQVNGPITEDKLAKVTGERTTDCGLNKENPAVSSHLVDGPAAEDKPAEVPLMDQETLNTEFSRTANTGKCNSSYMLESSSPVGEMAVPDGSKHLSIDKTSASSACMVEPITRRYLPQRKVSAVRNFPPLCGRSAPRLGKDKHVCLEGTSSLNNKTKGQQNLAVDDNPLKKVAATDVKEGKSNIQDEYNCNRKLVDIDQLDSERNSAERLKKLRACEPSSEMKKSTENEREKYATPPETSNHHQIKINSKAVVKEKNRDETKPSWISQSKHKLKGNFNRLQVTSQRKVILGLMADSECPWRSDKGTSKFKLGAGNSKGKRKKGDSFALPDRSRTEYSGLLNDSEKKPLKKKKGNPASVGMGELVLWEKEDYLNPNENDDTLQIVLRSNEFDVNLTPSSHSNFTGDENDPNVTRKKVRETLRLFQVICRKLLQEVESKLNERANNKRVDLVASKILKENGKYVNTGKQILGCVPGVEVGDEFQYRVELNIVGLHRPIQGGIDYVRHNGKILATSIVASGGYADDLDNSDVLTYTGQGGNVMNSDKEPEDQKLERGNLALMNSSIEKNPVRVIRGSESMDGKCRTYVYDGVYVVEAGWDEHGPHGKKIFKFRLQREPGQPELPLRVVKKSKKFKTREGVCVADISFGKERIPICAVNTIDDEKPPPFNYITSMIYPKFHLLPAEGCDCISGCSDLEKC 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4267g00009 940 MobiDBLite consensus disorder prediction 160 180 - -
Vium4267g00009 940 ProSiteProfiles YDG domain profile. 714 857 IPR003105 -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 458 481 - -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 1 29 - -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 547 598 - -
Vium4267g00009 940 Gene3D SET domain 878 940 IPR046341 -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 458 488 - -
Vium4267g00009 940 SUPERFAMILY SET domain 871 936 IPR046341 -
Vium4267g00009 940 SUPERFAMILY PUA domain-like 697 871 IPR015947 -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 1 18 - -
Vium4267g00009 940 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 428 935 - -
Vium4267g00009 940 Gene3D - 697 877 IPR036987 -
Vium4267g00009 940 MobiDBLite consensus disorder prediction 581 595 - -
Vium4267g00009 940 Pfam SAD/SRA domain 713 861 IPR003105 -
Vium4267g00009 940 SMART G9a_1 709 861 IPR003105 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4267g00009 654 934 Su(var)3-9 homologs AT5G04940 41.438 4.04e-52 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4267g00009 K11420 - gmx:100803378 1014.22