Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4266g00006 ATGGAAAGTTCCAAGAACAACAGAGTGGAGAAAAGAGGGTACGAGCTAGTTGATGAGGCTGACGATTCACAGCACCATCTTACACATCCAAAGAAACCAAAACTACCCGGTTTAGCCAGTGTGATTGTGGAAGCATTAAAGGTTGACAGTCTGCAGAGACTATGTTCATCTTTGGAACCTCTTCTCAGAAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTGGGCCATGATAAATTGGCTGAAAGATCTCAGCCACCAAGATTAGAAGGACCTGTGGCGAAGAATCTGCAGCTTCAGTTCAGAACAAGAATGCCTCCTCATTTGTTCACTGGGGGAAAGGTTGAGGGAGAGCAAGGATCTGCAATCCATGTTGTGTTAATGGATCCCAACACTGGCAGTGTGGTTCGTGTTGGACCAGAATCTGTTGCTAAATTGAATGTGGTGGTACTTGAAGGTGGCTTCAATGAGGAAGTGGATGATGATTGGACAAAAGATCACTTTGAAGGTCATGAAGTAAAGGAGCGTGATGGGAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTAGTCTGAAGGAAGGGGTAGGAACCTTAGGTGAGCTTACTTTTACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCCGGCTTGGTGTTAAGGTGGCTCCTGGTTATTGTGAGGAGATTCGTATTCGCGAGGGAAAGACCGAAGCCTTTGCTGTTAAAGATCACAGAGGAGAATTATACAAGAAACATTATCCACCTGCTTTGAATGATGAAGTTTGGAGATTGGATCGTATAGCTAAGGATGGGGCACTTCACAAGAAGTTGATTCAAGCAAAAATAGTAACTGTAGAAGATTTCCTACGACTTCTTGTCCGGGAGCCACAGAAGTTAAGAAGTATACTCGGTAGTGGAATGTCCAATAGAATGTGGGAGAATACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGCAAGCTCTTTGTTTACTACACCGACGAAACCGATACTGCAGGCATTGTATTCGATCATATATACCAGCTGAGAGGCCTCATTGCAGATGGCCAATTCTTCTCTTTGGAATCACTTACTCCAAATCAGAAGATGTCTGTGGATTCCCTGGTGAAGAAAGCATATGACAATTGGGACCAAGTTGTAGAATATGATGGAAAAGTTTTAAATTCGCTCACTAATGCAAAAAAGGGATCAAGAGCTTTGGCCACTCAGATAATGAACCATAACAGTTTCCCAGAGCAACAGTATTCCTCAGCAAAGAACAAGGTGTCATATGTGTCCTCTGAACCAAATCAACAGTCGCAGATAACAAATAACTACTCAGCCAGTCCCGGTTTGACTGACTATCTATTCGGGAGATCTGACAGTCAGATGGTAGGCACATCTTTAACTGACTCTGAGATATCATTGAATGGCAACATGAACTACATAACAGGTGAAAATCATGAAAATGCTGGCACTTATTTCGCTGGAGATTGGTCCCGGCCAAGAAGTGGACAAGGGTTGGAAGACATTGTGGCAGAAGAACTCCGTCTGAGGAGTTCAGAGATGTTGGAGAGTGATGATATGCAGAGGTTACTTAAGACAATCAATGCTGGAGTGAACATGTCAGGGAATGTTGGTCATTCTAATGAGGGTTGTTACGCCTATAGCCTTCAGTATGAGCCTCAGATGTATCATTCATTCGGTGAGGATCAGGGGAAGCCTTCGGGAAAAGCTGTAGTGGGGTGGCTTAAGCTCAAAGCTGCTTTAAGGTGGGGCATATTTATCAGAAAAAAAGCTGCTGAAAGGAGAGCACAGCTCACTGAGTTGAATTGA 1842 0.437 MESSKNNRVEKRGYELVDEADDSQHHLTHPKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLGHDKLAERSQPPRLEGPVAKNLQLQFRTRMPPHLFTGGKVEGEQGSAIHVVLMDPNTGSVVRVGPESVAKLNVVVLEGGFNEEVDDDWTKDHFEGHEVKERDGKRPLLTGDLQVSLKEGVGTLGELTFTDNSSWIRSRKFRLGVKVAPGYCEEIRIREGKTEAFAVKDHRGELYKKHYPPALNDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTDETDTAGIVFDHIYQLRGLIADGQFFSLESLTPNQKMSVDSLVKKAYDNWDQVVEYDGKVLNSLTNAKKGSRALATQIMNHNSFPEQQYSSAKNKVSYVSSEPNQQSQITNNYSASPGLTDYLFGRSDSQMVGTSLTDSEISLNGNMNYITGENHENAGTYFAGDWSRPRSGQGLEDIVAEELRLRSSEMLESDDMQRLLKTINAGVNMSGNVGHSNEGCYAYSLQYEPQMYHSFGEDQGKPSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4266g00006 613 PANTHER OS02G0177800 PROTEIN 10 531 IPR012416 GO:0005516
Vium4266g00006 613 MobiDBLite consensus disorder prediction 1 29 - -
Vium4266g00006 613 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Vium4266g00006 613 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Vium4266g00006 613 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Vium4266g00006 613 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4266g00006 Vium-Chr4266 24380 32017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4266g00006 1 613 Calmodulin-binding Proteins AT2G24300 61.935 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4266g00006 - - gmx:100775528 1111.29