Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4265g00018 ATGAGTGGTGCCATAGCAACTGACAGAGGGAATTGCTCGTCTTACAGCGGCTCTCAGATGCCGCATTCCTGCAAGAATGATCCCATCATAGTTGATCTCTCTCCGGAGGTCTCGAACAACAGGTCAGAGCATTGTTGCCGTGGTGGCCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCATTCTCTTCATTTGAACTTGAAGTGCGCAACGTGGGAGATAACCCACTTGGACAAGCACCTAACAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTGATCCCTCAGTGTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCTTAGCAAACGCATTACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCCATCGTCACATCTTGCCGAGATTGCAGTTGCGGATGCAGAGAAGCAGATAAAAGTACAGCGTCTTGCATAAGGCCTGATTCCTTGTCACGGTCCAATGAGGACAACACGATTGAAATTGTTGAATGCACCGACCACATGTGCCCCGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACAATTTCTAACTACAATTACAACAAAAACTACTCTAACTGGAACTTGCTGGTCCAACATCCTGGTTTCACTCAAAAAACATCAACCTACAGTTTCAACAGCACTAAACTTCCCACCCTCGGAATCCAAGATGGAGTTTCCCTGTTTTGGGGAATAGATTATTACAACAATGAGCTGTTGCATTCTGATAAGGCTAAAGTGGGTATTGTGACAACAGAAATACTATTGGATAAAGATCCAAATTCTTTCACAATAAGTAATGGATGGGCATTTCCTAGAAGAATATATTTCAACGGTGACAACTGCGAAATGCCTTTACCTGACAGTTTTCCCATGCTGCCAAATCGTAGCTCTACTCTTGCCCCTACTTATTGTGGTTTTACTCTCTTGTTTATCCTTTTGTTTCTTCCCCTATTACTCCTTTAG 1071 0.4407 MSGAIATDRGNCSSYSGSQMPHSCKNDPIIVDLSPEVSNNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNPLGQAPNNLTLMAPGPGYTCSPLLDTDPSVSSDFGGLRQVPVLRTWKSTCAYSSFLANALPVCCVSLSSFYNPIVTSCRDCSCGCREADKSTASCIRPDSLSRSNEDNTIEIVECTDHMCPVRVHWHFKNNYMNQWRVKLTISNYNYNKNYSNWNLLVQHPGFTQKTSTYSFNSTKLPTLGIQDGVSLFWGIDYYNNELLHSDKAKVGIVTTEILLDKDPNSFTISNGWAFPRRIYFNGDNCEMPLPDSFPMLPNRSSTLAPTYCGFTLLFILLFLPLLLL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4265g00018 356 PANTHER PROTEIN COBRA 1 335 IPR006918 GO:0010215|GO:0016020
Vium4265g00018 356 MobiDBLite consensus disorder prediction 1 21 - -
Vium4265g00018 356 PIRSF COBRA 1 356 IPR006918 GO:0010215|GO:0016020
Vium4265g00018 356 Pfam COBRA-like protein 1 128 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4265g00018 Vium-Chr4265 108286 110193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4265g00018 1 356 COBRA Gene Family AT3G29810 47.514 1.03e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4265g00018 - - vra:106760500 706.057