Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4265g00015 ATGGGAATTCGTCTGCCAATATTTATGGCTCTTCATGCGAACAGGATATTCAAGTGGCAGCAGCATCTGCATGACAGAAACCATTCCAACGTTCCAAAGGGTCACGTTGCAGTGTATGTGGGAGAGGCTCAAAAGAAGAGGTTCGTGGTTCCAATATCTTACTTGAACCATCCTTCGTTTCTTGATCTGCTGAACCGAGCGCAGGAAGAGTTTGGCTACAATCATCCAATGGGAGGTCTCACCATCCCTTGCAAAGAAGAGGCTTTCATCTCTCTCACCTCTCAATTACGTTCCTGA 297 0.4646 MGIRLPIFMALHANRIFKWQQHLHDRNHSNVPKGHVAVYVGEAQKKRFVVPISYLNHPSFLDLLNRAQEEFGYNHPMGGLTIPCKEEAFISLTSQLRS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4265g00015 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 96 IPR003676 GO:0009733
Vium4265g00015 98 Pfam Auxin responsive protein 14 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4265g00015 Vium-Chr4265 92807 93541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4265g00015 30 89 Calmodulin-binding Proteins AT5G20810 53.333 1.16e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4265g00015 K14488 - gmx:102663761 197.208