Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4265g00010 ATGGCTATTCGTTTGCCTTGTGTTTTGAGTGCAAAATACATTCTTCGTCGATCAAATCCGCTTGCAAATCATGCAGCTGCAACATCAGTGGGTGTGCCTAAAGGGCACTTTGCCGTGTACGTTGGAGAGGGTAAAAAGAAGAGATTTGTGATACCAGTATCAGTGTTGAATCAACCCTCATTTCAGCGACTGTTAAGCATAGCAGAGGAAGAATTTGGCTTCAGTCATCCAATGGGTGGGCTTACGATTCCATGCACAGAAGACATTTTCCTTAACATCATCTTCTTTTCGTAG 294 0.432 MAIRLPCVLSAKYILRRSNPLANHAAATSVGVPKGHFAVYVGEGKKKRFVIPVSVLNQPSFQRLLSIAEEEFGFSHPMGGLTIPCTEDIFLNIIFFS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4265g00010 97 Pfam Auxin responsive protein 24 94 IPR003676 GO:0009733
Vium4265g00010 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 29 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4265g00010 Vium-Chr4265 50403 50757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4265g00010 32 94 Calmodulin-binding Proteins AT4G34750 52.381 2.55e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4265g00010 K14488 - gmx:100811334 164.851