Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4265g00009 ATGGCTATTCGTTTGCCCAGTGTTTTGAGTGCTAGACACATTCTTCGCCGGTCTAGTCTTTTTGCAAATCATGCAGCTGCAACATCACTCGATGTGCCCAAAGGCCACTTTGCTGTGTACGTAGGAGATGCTGAAAAGAAGAGATTCGTGATACCTGTGTCATATTTGAACCACCCTTCATTTCAAGAGCTTCTAAGTATAGCAGAGGAAGAATTTGGCTTCAGTCATCCAATGGGTGGTCTCATCATTCCCTGCACACCAGAATTTTTCCTTAACATCACCTCTAGCTTACATAGGCTATGA 303 0.4389 MAIRLPSVLSARHILRRSSLFANHAAATSLDVPKGHFAVYVGDAEKKRFVIPVSYLNHPSFQELLSIAEEEFGFSHPMGGLIIPCTPEFFLNITSSLHRL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4265g00009 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 97 IPR003676 GO:0009733
Vium4265g00009 100 Pfam Auxin responsive protein 16 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4265g00009 Vium-Chr4265 46594 47117 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4265g00009 31 90 Calmodulin-binding Proteins AT5G20810 60.000 3.52e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4265g00009 K14488 - gmx:100811334 179.874