Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4265g00008 ATGATGATGGCTATTCGTTTTCCAGCTGCCTTCAGTGCCAAACACATCCTTCGCAGATCTAATCTGTTTGCAAATCAGGCACTCGATGTGCCTAAAGGGTACTTAGCTGTGTATGTAGGAGAGGGTGAAAAGAAGAGATTTGTGATACCAGTGTCAGTGTTGAATCAACCCTCGTTTCAAAAACTGTTGAGTATAGCAGAGGAAGAATTTGGCTTCGATCATCCAATGGGTGGCCTTACTATTCCATGCACACAAGATATCTTTGTTAACATCACCTCTGGCTTACATAGGCTATGA 297 0.4276 MMMAIRFPAAFSAKHILRRSNLFANQALDVPKGYLAVYVGEGEKKRFVIPVSVLNQPSFQKLLSIAEEEFGFDHPMGGLTIPCTQDIFVNITSGLHRL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4265g00008 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 94 IPR003676 GO:0009733
Vium4265g00008 98 Pfam Auxin responsive protein 21 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4265g00008 Vium-Chr4265 43942 44516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4265g00008 29 88 Calmodulin-binding Proteins AT3G43120 60.000 6.00e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4265g00008 K14488 - aprc:113865304 167.548