Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4259g00001 CCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCCTCGATTCAGCCAAGTCCACAATCTTCGTCATTCCCGAGTCCAGTGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACTCGCATTGACGCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACCCCACCTCTTTCCTCTCCCCGAACCTCCAAGCGCAAGGCTGACTTCGATTCCCTCTCCAACGCTTCCTTCCGCCACCCTCTTTTCGCCACCTCCGCCCCCTCCAGCCCCTCGCGCCGCCACCACGTCGCGACTTCCACCATCCCCGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCACGGTCAGACCCCCGCCGGTCCCCCTTCCCCTACTTTCAACCTCATGAAACCCGCTATGCACCAGATCGCTCCTCAGGAGGGCGTACACTGGGGTTCCGTTGCGGAGATAGGCAGAGGAGTCTCCGATTTTGAATTCGAGAATGGCAGAGTAAAGCCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGACCTTACTCTCGGATTCGGAAAAGCTTGA 687 0.5808 PTGSEIGGTPPNISACSSIQPSPQSSSFPSPVPSYHASPTSSSFPSPTRIDANPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKADFDSLSNASFRHPLFATSAPSSPSRRHHVATSTIPECDESDASTVDSASGRWVSFHGQTPAGPPSPTFNLMKPAMHQIAPQEGVHWGSVAEIGRGVSDFEFENGRVKPWEGERIHEVGMDDLDLTLGFGKA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4259g00001 228 MobiDBLite consensus disorder prediction 1 49 - -
Vium4259g00001 228 MobiDBLite consensus disorder prediction 73 98 - -
Vium4259g00001 228 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 52 IPR008540 -
Vium4259g00001 228 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 15 224 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vium4259g00001 228 MobiDBLite consensus disorder prediction 73 91 - -
Vium4259g00001 228 MobiDBLite consensus disorder prediction 112 126 - -
Vium4259g00001 228 MobiDBLite consensus disorder prediction 112 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4259g00001 Vium-Chr4259 5784 6801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4259g00001 1 228 BZR Transcription Factor Family AT1G75080 51.600 2.11e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vium4259g00001 BES1_N 7.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4259g00001 K14503 - gmx:100795837 356.295