Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4257g00005 ATGGCAGAGAAGATTCAGCTTCTTGAAATATCTAAAAGGAAGCTGCTGGGACAAAGTGTGAGTTGTTGTTCCTATGATGAACTCCAAGAAATCGAAGATCAGCTGCAGAGAAGTTTGCTAAGAGTCAGACAAAGAAAGGCTCAACTATACATGGAGCAGATTGATCAGCTACGATCCCAGGAGAGTAACTTGCTCCAAGAGAATGCCAAATTAACTGAAAGGTGGCAGAGGTCGGAAAACTCACAAGTTGAAGCAGAAGAAGAAGCGGCACCTTACTGTTCGAGTAGCCAGATTTTAGAAGTGGATACAGAATTATTTATTGGACTGCCAAAGCAGGGTTGCTCATTGTAG 351 0.4274 MAEKIQLLEISKRKLLGQSVSCCSYDELQEIEDQLQRSLLRVRQRKAQLYMEQIDQLRSQESNLLQENAKLTERWQRSENSQVEAEEEAAPYCSSSQILEVDTELFIGLPKQGCSL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4257g00005 116 Coils Coil 25 74 - -
Vium4257g00005 116 Pfam K-box region 2 75 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vium4257g00005 116 ProSiteProfiles K-box domain profile. 1 89 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4257g00005 Vium-Chr4257 43689 54107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4257g00005 1 110 MADS-box Gene Family AT4G22950 41.964 3.02e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4257g00005 - - pvu:PHAVU_007G065500g 166.007