Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4257g00004 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAGAGGGGTGGAGAAGCTCAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCTTTCGATTTTCATCCATTTCACTTTTCCATTAACCACCAGCCATCCTCTTTCAAGTCTCGCACCCGAGAAGACCACACTCTCTCTAAAGGAGCTGAAGGACCAAGGCATAGCTTGGAGTCAGAAGATGGTACTACAGTGTCATCAATCTCAAAAGAAGCAAATTTTAAAATACCAAAGAACATTCAGATCAGAACAGGAGGGAGCTCAAGATCAAAAACAGAAATTAGTGATCTTTCGTCAGAAATCAGTGTCTCTCCAGGGACCAAGACACCGACTTTGGTTGCAAGGTTAATGGGTCTGGATCTTCTTCCTGATGCACATTCCCCTTCTTCCCCGTGCCTTTCCACTCCAAACCTTTATAGATCACGACAACATATCAAACTAATCAAACATAGAAACAGCACGGGAAGTGACTTCTTGCCTGGGGTTCCTAAAATGTCCTCTGCAAGAAAATCGGATGTTGAGCATAGACTCTCACTCCAAATCAACAAGGAGAACACAGTTCCGTATGAGGATTTTGAGGTTCCTCTGTTTTCTTTTACAAAGAGAAAATATGATGAGAACAATAGCCGGAGTCCAAGTCACTATGCCAAGCAAATTGTCAAACAGGTTAGAGAAAGTGTGAGCAGAAAGGTTGGACGCGACATCACCAACACTATCAAAAACAGAGACCATGAAGAAGAGGAATGTGTAAGCAAAATCAAATTCAAGAAAACTTCAAAAACTTCAGTGAATGAATCTTGCCCTGGAAAACTTTCAAACTCATCTTATTCCCCAAGGCTCAGCAGATTTATTGAATCCAAACAAAAATCAAGCACAAAACCATCGCCAACAACTCCAAAAAATCAAAGCACACACTCGGTGCTAAAACCACAATCACCTCCACGTGCGATCAACATTGAAACTGAGCTTTCAGAAGTTTCTACAAAGCCAAAGCCTCAGGCATTGGCCAAGAAAGAGTTGCAGAACCAAAAAGCAGTCACAAAATACAAGAAAACAACCTTTGGAAAGTCGAGTACGAGAGTCAATATGCCTCCACAAACATCAATTAGAAACCAGCAAGAAGAGCCATTTATTATTCGTTATCCATTAGTCACTAAAGTCAATGACATCAAAACCAAAAAGAAGAGAACTCTTCCACTTTCAAGCGATCTTTTTAATAGTCACAACACGGTTCCAAATCTTCTCCCTGTCAAGATAGGTCTTTCTCCTCAAAAACAGACACGGGTGAGTTATGCTGATGAATGTCGAGATGCAAAACGCAACACACAGTTATTTAGTTGTTCGCGCCAGACGTACAGAGAAAAAGCGCCACGACCACCCGCACCCCGAGGACCAACAACCTGCGATCACGACAAATCTCACGGCGCCTTCACCACCATCTCCTCCGCCGCACTCCACGAAGGACCAGAGTTTCACTACGTCACGATCATCTTGTCCCGTGCCACTGGGTCCCACAGCAACGCCACCACACATATACCCCACCTCCATTTTCAGTGGTTCTCTCCCACCCACCCCTTGGACCCTTCACTCTTTCACAGTCTGGAGCGCTACCCAACATCCCATTCCTTTGTCTCTTTCCCAGAAGACAACAAAGATTGCGTATTTGAGCGGAAACACGGGCTGGATCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTGGACGAGTTGCTGTCGGAGATTCTAGTTAGGCCGAAGCGTTTCAGAGGGAGGCTGTTGGAGACGGTGTGGGAGAGGGTTCGGAGTTTACCACGTGCGAAGTGCGAGGTTTTGGAGGACATTGATGGGTTGGTAGAGATGGAGGAGATGAGGGAAGAAGAGGAAGAAAAAGGGTTGGTGAAGGAGATAGAGGGGAACATAGTGGAGTGGTTGGTGCATGAAACGTTAACCGTTATGGTTGGTGGCGTGGATACGTAA 2019 0.4557 MGKEWHWGGRSSKRGGEAQTEIPSGCMCAVFQAFDFHPFHFSINHQPSSFKSRTREDHTLSKGAEGPRHSLESEDGTTVSSISKEANFKIPKNIQIRTGGSSRSKTEISDLSSEISVSPGTKTPTLVARLMGLDLLPDAHSPSSPCLSTPNLYRSRQHIKLIKHRNSTGSDFLPGVPKMSSARKSDVEHRLSLQINKENTVPYEDFEVPLFSFTKRKYDENNSRSPSHYAKQIVKQVRESVSRKVGRDITNTIKNRDHEEEECVSKIKFKKTSKTSVNESCPGKLSNSSYSPRLSRFIESKQKSSTKPSPTTPKNQSTHSVLKPQSPPRAINIETELSEVSTKPKPQALAKKELQNQKAVTKYKKTTFGKSSTRVNMPPQTSIRNQQEEPFIIRYPLVTKVNDIKTKKKRTLPLSSDLFNSHNTVPNLLPVKIGLSPQKQTRVSYADECRDAKRNTQLFSCSRQTYREKAPRPPAPRGPTTCDHDKSHGAFTTISSAALHEGPEFHYVTIILSRATGSHSNATTHIPHLHFQWFSPTHPLDPSLFHSLERYPTSHSFVSFPEDNKDCVFERKHGLDPRCNRRLLFDLVDELLSEILVRPKRFRGRLLETVWERVRSLPRAKCEVLEDIDGLVEMEEMREEEEEKGLVKEIEGNIVEWLVHETLTVMVGGVDT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4257g00004 672 MobiDBLite consensus disorder prediction 46 80 - -
Vium4257g00004 672 Pfam Domain of unknown function (DUF4378) 504 661 IPR025486 -
Vium4257g00004 672 MobiDBLite consensus disorder prediction 465 486 - -
Vium4257g00004 672 Pfam DUF761-associated sequence motif 112 141 IPR032795 -
Vium4257g00004 672 MobiDBLite consensus disorder prediction 1 20 - -
Vium4257g00004 672 MobiDBLite consensus disorder prediction 50 72 - -
Vium4257g00004 672 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 669 - -
Vium4257g00004 672 MobiDBLite consensus disorder prediction 299 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4257g00004 Vium-Chr4257 23395 26987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4257g00004 94 664 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.270 7.17e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4257g00004 - - vun:114190841 1187.17