Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4257g00003 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAGAGGGGTGGAGAAGCTCAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCTTTCGATTTTCATCCATTTCACTTTTCCATTAACCACCAGCCATCCTCTTTCAAGTCTCGCACCCGAGAAGACCACACTCTCTCTAAAGGAGCTGAAGGACCAAGGCATAGCTTGGAGTCAGAAGATGGTACTACAGTGTCATCAATCTCAAAAGAAGCAAATTTTAAAATACCAAACATTCAGATCAGAACAGGAGGGAGCTCAAGATCAAAAACAGAAATTAGTGATCTTTCGTCAGAAATCAGTGTCTCTCCAGGGACCAAGACACCGACTTTGGTTGCAAGGTTAATGGGTCTGGATCTTCTTCCTGATGCACATTCCCCTTCTTCCCCGTGCCTTTCCACTCCAAACCTTTATAGATCACGACAACATATCAAACTAATCAAACATAGAAACAGCACGGGAAGTGACTTCTTGCCTGGGGTTCCTAAAATGTCCTCTGCAAGAAAATCGGATGTTGAGCATAGACTCTCACTCCAAATCAACAAGGAGAACACAGTTCCGTATGAGGATTTTGAGGTTCCTCTGTTTTCTTTTACAAAGAGAAAATATGATGAGAACAATAGCCGGAGTCCAAGTCACTATGCCAAGCAAATTGTCAAACAGGTTAGAGAAAGTGTGAGCAGAAAGGTTGGACGCGACATCACCAACACTATCAAAAACAGAGACCATGAAGAAGAGGAATGTGTAAGCAAAATCAAATTCAAGAAAACTTCAAAAACTTCAGTGAATGAATCTTGCCCTGGAAAACTTTCAAACTCATCTTATTCCCCAAGGCTCAGCAGATTTATTGAATCCAAACAAAAATCAAGCACAAAACCATCGCCAACAACTCCAAAAAATCAAAGCACACACTCGGTGCTAAAACCACAATCACCTCCACGTGCGATCAACATTGAAACTGAGCTTTCAGAAGTTTCTACAAAGCCAAAGCCTCAGGCATTGGCCAAGAAAGAGTTGCAGAACCAAAAAGCAGTCACAAAATACAAGAAAACAACCTTTGGAAAGTCGAGTACGAGAGTCAATATGCCTCCACAAACATCAATTAGAAACCAGCAAGAAGAGCCATTTATTATTCGTTATCCATTAGTCACTAAAGTCAATGACATCAAAACCAAAAAGAAGAGAACTCTTCCACTTTCAAGCGATCTTTTTAATAGTCACAACACGGTTCCAAATCTTCTCCCTGTCAAGATAGGTCTTTCTCCTCAAAAACAGACACGGGTGAGTTATGCTGATGAATGTCGAGATGCAAAACGCAACACACAGTTATTTAGTTGTTCGCGCCAGACGTACAGAGAAAAAGCGCCACGACCACCCGCACCCCGAGGACCAACAACCTGCGATCACGACAAATCTCACGGCGCCTTCACCACCATCTCCTCCGCCGCACTCCACGAAGGACCAGAGTTTCACTACGTCACGATCATCTTGTCCCGTGCCACTGGGTCCCACAGCAACGCCACCACACATATACCCCACCTCCATTTTCAGTGGTTCTCTCCCACCCACCCCTTGGACCCTTCACTCTTTCACAGTCTGGAGCGCTACCCAACATCCCATTCCTTTGTCTCTTTCCCAGAAGACAACAAAGATTGCGTATTTGAGCGGAAACACGGGCTGGATCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTGGACGAGTTGCTGTCGGAGATTCTAGTTAGGCCGAAGCGTTTCAGAGGGAGGCTGTTGGAGACGGTGTGGGAGAGGGTTCGGAGTTTACCACGTGCGAAGTGCGAGGTTTTGGAGGACATTGATGGGTTGGTAGAGATGGAGGAGATGAGGGAAGAAGAGGAAGAAAAAGGGTTGGTGAAGGAGATAGAGGGGAACATAGTGGAGTGGTTGGTGCATGAAACGTTAACCGTTATGGTTGGTGGCGTGGATACGTAA 2016 0.4559 MGKEWHWGGRSSKRGGEAQTEIPSGCMCAVFQAFDFHPFHFSINHQPSSFKSRTREDHTLSKGAEGPRHSLESEDGTTVSSISKEANFKIPNIQIRTGGSSRSKTEISDLSSEISVSPGTKTPTLVARLMGLDLLPDAHSPSSPCLSTPNLYRSRQHIKLIKHRNSTGSDFLPGVPKMSSARKSDVEHRLSLQINKENTVPYEDFEVPLFSFTKRKYDENNSRSPSHYAKQIVKQVRESVSRKVGRDITNTIKNRDHEEEECVSKIKFKKTSKTSVNESCPGKLSNSSYSPRLSRFIESKQKSSTKPSPTTPKNQSTHSVLKPQSPPRAINIETELSEVSTKPKPQALAKKELQNQKAVTKYKKTTFGKSSTRVNMPPQTSIRNQQEEPFIIRYPLVTKVNDIKTKKKRTLPLSSDLFNSHNTVPNLLPVKIGLSPQKQTRVSYADECRDAKRNTQLFSCSRQTYREKAPRPPAPRGPTTCDHDKSHGAFTTISSAALHEGPEFHYVTIILSRATGSHSNATTHIPHLHFQWFSPTHPLDPSLFHSLERYPTSHSFVSFPEDNKDCVFERKHGLDPRCNRRLLFDLVDELLSEILVRPKRFRGRLLETVWERVRSLPRAKCEVLEDIDGLVEMEEMREEEEEKGLVKEIEGNIVEWLVHETLTVMVGGVDT 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4257g00003 671 MobiDBLite consensus disorder prediction 46 80 - -
Vium4257g00003 671 Pfam Domain of unknown function (DUF4378) 503 660 IPR025486 -
Vium4257g00003 671 MobiDBLite consensus disorder prediction 50 72 - -
Vium4257g00003 671 MobiDBLite consensus disorder prediction 298 327 - -
Vium4257g00003 671 MobiDBLite consensus disorder prediction 464 485 - -
Vium4257g00003 671 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 668 - -
Vium4257g00003 671 Pfam DUF761-associated sequence motif 111 140 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4257g00003 Vium-Chr4257 23395 26988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4257g00003 93 663 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.270 7.59e-43 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4257g00003 - - vun:114190841 1180.62