Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4234g00003 ATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTATTTAAAGAGCCTACAGAATGTGAACCGAATATCTCCAACTATTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAGTGGACAGACCAGTTTGAGTCAGGCATTCAGACCATTGCTGTAATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCAGAAGACCTTCATTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCCCAACTCTTTTCTTCAACAAGAAACACTTCCTCTTCTACGTCTGTTCCTTCAAAACCATCTACCATTCCAGTTAGGCCACCTCCACTATTCAACTGGGGTCAGAGGCCACTCACTTCTGCCACCTCCATGCTATCTTCACCCAATTTTCAACAACATGCAGCTAGACTTGGGTTCCCTAAAGATGAGGCAAACATGTTTCTGATTCCTCATGCATCATCTGAGAGTGCAAGAGTGGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACCGGAAGAACAGATGATGCTAAGCTGTTGTTCAACCCTGATACCTTGGGGAACAAACCAGGTGATCAAACTCAGCATCATCACCCTCTTACTCAAAATCCCAATTCAGATGCCTCCAACATGCAGAATGCCAGTGCAAGCAACCCAAATGAGTTCTTGAGCTTGGATAACAACCAAGACGATGCAAGAAAAATGGACAAGTTCAAGAGAAGCTTCACTCTACCTGCAAGAGTAGCCTCATCATCTTCATCCACTTCAATGGATCACCATCAAACACAAGGTGTGCAGTTTAGGAATTCAGAAGGAGCTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 930 0.4462 MGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPVRPPPLFNWGQRPLTSATSMLSSPNFQQHAARLGFPKDEANMFLIPHASSESARVEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPDTLGNKPGDQTQHHHPLTQNPNSDASNMQNASASNPNEFLSLDNNQDDARKMDKFKRSFTLPARVASSSSSTSMDHHQTQGVQFRNSEGAMYPDVMETFLE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4234g00003 309 MobiDBLite consensus disorder prediction 212 251 - -
Vium4234g00003 309 MobiDBLite consensus disorder prediction 206 252 - -
Vium4234g00003 309 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 1 82 IPR025610 -
Vium4234g00003 309 PANTHER GB|AAF34833.1 1 309 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4234g00003 Vium-Chr4234 5258 10266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4234g00003 1 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.209 3.84e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4234g00003 - - gmx:100814723 550.436