Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4230g00033 ATGGAAGATGTGTGGGACGGCATCAACCTCACTTCCTTAAGCGGCCACAACACCAACACTACCCCCACCTCCAAAGGTGCAAATTTTCAAGACTTTCTAGCTCGACCCTTTAACAGCTTCACCGTGGACACATCTCCGGTGACTGCTCTCACCTTGAGCACGCGCTCTGAGTACCCTCCTCCGCAAAAGGACCTGCAATCGGTGCATACTGCTTCAAAGACCGAACCTTTTGCCCACCCATTTTCGAATAAAAGAGCCACACCATCTTCAAGGGACATGCGTGACGCACGACTCATGAAGAATCGTGAATCTGCTGCTCGATCCAGAGCCAGAAAGCAGGAAAATATTGCTTCTTCTTCAACTCTTAGCTTTAGAGTGTCACCAAAATCCACTGTTTCGGGTTTTTTGCTTAACAATGATCTTTGTCCGTTTTGCTTTTTCTGTGTAGGCTTACTTGTTTGA 462 0.474 MEDVWDGINLTSLSGHNTNTTPTSKGANFQDFLARPFNSFTVDTSPVTALTLSTRSEYPPPQKDLQSVHTASKTEPFAHPFSNKRATPSSRDMRDARLMKNRESAARSRARKQENIASSSTLSFRVSPKSTVSGFLLNNDLCPFCFFCVGLLV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4230g00033 153 MobiDBLite consensus disorder prediction 52 95 - -
Vium4230g00033 153 MobiDBLite consensus disorder prediction 52 87 - -
Vium4230g00033 153 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 113 IPR043452 GO:0003700|GO:0045893
Vium4230g00033 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 97 111 IPR004827 GO:0003700|GO:0006355
Vium4230g00033 153 Gene3D - 93 126 - -
Vium4230g00033 153 MobiDBLite consensus disorder prediction 101 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4230g00033 Vium-Chr4230 232021 233075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4230g00033 1 121 bZIP Transcription Factor Family AT2G17770 33.766 1.10e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4230g00033 K14432 - vum:124837213 310.842