Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4230g00026 ATGATGATGAACCTTTCCACCCTTAAATCTCTTAATGTACGTCTTTTTGTTGTGATGTTTTACATGTTTGATGTAACAGCCAAATCACAAACAAATTACAGCAAGTTTGCAATTCCTGCTGTCATAGCTTTTGGTGATTCAATCTTGGATACTGGGAACAACGATTATATTGAAACCATAATGAAAGCAGATTTCAGACCATATGGGAGGGATTTCTTCGGAGGAAAACCCACAGGAAGGTTTAGCAATGGCAGGATCCCTTCAGACTTTTTAGCTGAAAAGTTTGGAATAAAGGACACTCTGCCACCCTATCTTGATCCAACTCTGGAGACTGAAGACCTCTTAACTGGGGTATCTTTTGCCTCTGCTGGCTCTGGATATGATCCTCTAACACCAGAACTAGCAGCAGTGTTATCAGTAGAGGATCAACTGAATATGTTCAAAGATTACATAGGAAAACTGAAGGCCTATGCAGGGAAAGAAAGGACAGCTTTCATTCTAGCAGAAAGCGTATTTTTTATCAGTATGGGAAGCAATGACGTTTCAGTAACATATTTCATGTCACCATATCGGAGAAATGAGTATAATGTTGAAGAGTACACAAGTATGCTAGTCAATATATGTTCAAATTTTCTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTGAGCCTATCTCCAATAGGATGTGTGCCACTGCAAAGAACATTAGGGGGAGGTGGAGAAAGGAATTGCGTAGAATCATTAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTTTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACGACAAATTTGGATTTGAAGTGGGGGATACTGCATGCTGTGGCGTTGGAAATATTGAAGCAGGCATTCTGTGTAATTCTTTCTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAGCGAACTTACAGTATGCTTGTCACAAGTACCATGGCAAAGAATGTTCACAAGTTTGTTTGA 1089 0.3921 MMMNLSTLKSLNVRLFVVMFYMFDVTAKSQTNYSKFAIPAVIAFGDSILDTGNNDYIETIMKADFRPYGRDFFGGKPTGRFSNGRIPSDFLAEKFGIKDTLPPYLDPTLETEDLLTGVSFASAGSGYDPLTPELAAVLSVEDQLNMFKDYIGKLKAYAGKERTAFILAESVFFISMGSNDVSVTYFMSPYRRNEYNVEEYTSMLVNICSNFLQELYKYGARKIGVLSLSPIGCVPLQRTLGGGGERNCVESLNQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYDKFGFEVGDTACCGVGNIEAGILCNSFSLKVCENATKYVFWDSIHPTERTYSMLVTSTMAKNVHKFV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4230g00026 362 PANTHER GDSL ESTERASE/LIPASE EXL3 21 351 - -
Vium4230g00026 362 CDD SGNH_plant_lipase_like 39 350 IPR035669 -
Vium4230g00026 362 Pfam GDSL-like Lipase/Acylhydrolase 41 348 IPR001087 GO:0016788
Vium4230g00026 362 FunFam GDSL esterase/lipase APG 29 358 - -
Vium4230g00026 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Vium4230g00026 362 Gene3D SGNH hydrolase 27 358 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4230g00026 Vium-Chr4230 189990 191993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4230g00026 37 349 Pollen Coat Proteome AT1G75910 40.881 5.81e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4230g00026 - - gmx:100797172 531.946