Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4230g00024 ATGAAAGCAGATTTCAGACCATATGGGAGGGATTTCTTCGGAGGAAAACCCACAGGAAGGTTTAGCAATGGCAGGATCCCTTCAGACTTTTTAGCTGAAAAGTTTGGAATAAAGGACACTCTGCCACCCTATCTTGATCCAACTCTGGAGACTGAAGACCTCTTAACTGGGGTATCTTTTGCCTCTGCTGGCTCTGGATATGATCCTCTAACACCAGAACTAGCAGCAGTGTTATCAGTAGAGGATCAACTGAATATGTTCAAAGATTACATAGGAAAACTGAAGGCCTATGCAGGGAAAGAAAGGACAGCTTTCATTCTAGCAGAAAGCGTATTTTTTATCAGTATGGGAAGCAATGACGTTTCAGTAACATATTTCATGTCACCATATCGGAGAAATGAGTATAATGTTGAAGAGTACACAAGTATGCTAGTCAATATATGTTCAAATTTTCTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTGAGCCTATCTCCAATAGGATGTGTGCCACTGCAAAGAACATTAGGGGGAGGTGGAGAAAGGAATTGCGTAGAATCATTAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTTTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACGACAAATTTGGATTTGAAGTGGGGGATACTGCATGCTGTGGCGTTGGAAATATTGAAGCAGGCATTCTGTGTAATTCTTTCTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAGCGAACTTACAGTATGCTTGTCACAAGTACCATGGCAAAGAATGTTCACAAGTTTGTTTGA 909 0.4015 MKADFRPYGRDFFGGKPTGRFSNGRIPSDFLAEKFGIKDTLPPYLDPTLETEDLLTGVSFASAGSGYDPLTPELAAVLSVEDQLNMFKDYIGKLKAYAGKERTAFILAESVFFISMGSNDVSVTYFMSPYRRNEYNVEEYTSMLVNICSNFLQELYKYGARKIGVLSLSPIGCVPLQRTLGGGGERNCVESLNQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYDKFGFEVGDTACCGVGNIEAGILCNSFSLKVCENATKYVFWDSIHPTERTYSMLVTSTMAKNVHKFV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4230g00024 302 FunFam GDSL esterase/lipase APG 1 298 - -
Vium4230g00024 302 PANTHER GDSL ESTERASE/LIPASE EXL3 1 291 - -
Vium4230g00024 302 Pfam GDSL-like Lipase/Acylhydrolase 15 288 IPR001087 GO:0016788
Vium4230g00024 302 Gene3D SGNH hydrolase 2 298 IPR036514 -
Vium4230g00024 302 CDD SGNH_plant_lipase_like 1 290 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4230g00024 Vium-Chr4230 189588 191993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4230g00024 1 289 Pollen Coat Proteome AT1G75910 39.116 1.55e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4230g00024 - - gmx:100797172 451.825