Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4202g00001 ATGGAACTAACCACAATCTTATGCTTCTCTGCTGTTACCTTTCTCTTCATTCTTTTTCTCTTCAGGACACTCATCAACCCCTTTGTCTCCAAACGCCCTGACTTACCACTCCCACCTGGGACCATGGGCTGGCCTTATATAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCTCCAAAATCAAAAGGTATGGCTCTATGTTCAAGTCCCACATTCTGGGATGTCCCTGTGTGATGATTTCCAGCTCCGAGGCTGCCAAGTTTGTACTCAACAAAGCTCAGCTGTTCAAGCCAACATTCCCAGCTAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGAGAGTACCATGCTAACTTGAGACGGCTTGTTCTTCGCACCTTCATGCCAGAAGCCATAAAAAACATCGTCCCAGACATTGAATCCATTGCCCAAGATTGCTTAAAATCCTGGGGAGGCCGCTTGATCACCACTTTCCTTGAAATGAAAACGTTCACCTTCAACGTTGCCCTGCTTTCAATTTTCGGGAAAGACGAGATTCTGTACAGAGATGCTCTGAAACGGTGCTACTACACTCTGGAGCAAGGGTACAACTCAATGCCCATTAACGTTCCGGGGACACTGTTCCACAAGGCGATGAAAGCGAGAAAGGAGCTTGCACAGATCTTGGCCCAAATAATCTCTAGCAGGAGGCAGAGGAAACAGGATTACAAGGACTTGTTGGGTTCGTTCATGGGAGAGAAAGCAGGGCTCACCGACGAGCAGATAGCAGATAATGTAATTGGCGTCATTTTTGCAGCTCGTGATACCACGGCCAGTGTGCTGACGTGGATTGTCAAGTACCTTGGTGAAAACCCCAGTGTCCTAGAAGCTGTTACTGAGGAACAAGAGTGCATATTGAAGAGCAAGGAAGAAAGTGGAGAGGATAAGGGTCTGAATTGGGAAGATACCAAAAAGATGCCAATAACTTCAAGGGTTATTCAGGAAACACTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAGGCAGTAGAAGACGTTGAATATCAAGGGTATCTCATACCAAAAGGGTGGAAAGTGCTACCTCTATTTAGGAACATACACCACAGTCCAGAGAACTTCAAGGAGCCAGAAAAATTTGACCCCTCAAGATTTGAGGCTGCACCAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCAGGGAATGAACTGGCCAAGTTGGAGATTTTGGTCCTCCTACATCATCTCACCACAAAATTCAGGTGGTCTGTTGAGGATGCAAAGAATGGGATTCAATATGGCCCTTTTGCTCTTCCCCAAAATGGTTTACCCATCACACTATATCCCAAGAAGAAGTAG 1404 0.453 MELTTILCFSAVTFLFILFLFRTLINPFVSKRPDLPLPPGTMGWPYIGETFQMYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSSEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAQDCLKSWGGRLITTFLEMKTFTFNVALLSIFGKDEILYRDALKRCYYTLEQGYNSMPINVPGTLFHKAMKARKELAQILAQIISSRRQRKQDYKDLLGSFMGEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQECILKSKEESGEDKGLNWEDTKKMPITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPEKFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEILVLLHHLTTKFRWSVEDAKNGIQYGPFALPQNGLPITLYPKKK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4202g00001 467 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PANTHER CYTOCHROME P450 26 34 439 - -
Vium4202g00001 467 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vium4202g00001 467 SUPERFAMILY Cytochrome P450 33 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 CDD CYP90-like 66 464 - -
Vium4202g00001 467 Pfam Cytochrome P450 38 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 Gene3D Cytochrome P450 29 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4202g00001 467 FunFam Abscisic acid 8 28 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4202g00001 Vium-Chr4202 23196 26003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4202g00001 15 460 Cytochrome P450 AT4G19230 73.438 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4202g00001 K09843 - gmx:100170674 868.226