Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4185g00014 ATGGCAACAAGCGAAGAAGTTGTTGCGGCGGCTCCGGCGCCGGAGGCAGGGCTGAAGCACAAGCTGGAGCGAAAATGGACGTTTTGGTGCGACAATCAATCCAAACCTAAACAGGGCGCTGCTTGGGGAACCTCTCTGCGCAAGGTCTACACTTTCGACACTGTAGAAGAGTTCTGGTGTTTGTATGATCAGATATTTAAGCCCAAGGATTTGCAAAACAACGCGGATTTTCACTTGTTCAAGACTGGTATTGAACCTAAGTGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGGCTGTCACCAGCAACATCGGCAGGAAGGATAACCTTGAGAAGATGTGGCTTGAAACTCTGATGGCGTTGATTGGGGAGCAATTTGAGGATGCTGAGGACATATGCGGTGTGGTTGCTAGCGTGCGCCAATGGCAAGACAAACTTTCACTGTGGACAAAGACAGCGGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAATATAACATACAACTTTCATGATGACTCTAGAACCAAAGGAGCAACAAAGGGTCGATACACCGTATAA 594 0.4815 MATSEEVVAAAPAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPKDLQNNADFHLFKTGIEPKWEDPECANGGKWAVTSNIGRKDNLEKMWLETLMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDNITYNFHDDSRTKGATKGRYTV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4185g00014 197 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 14 188 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vium4185g00014 197 Gene3D RNA Cap, Translation Initiation Factor Eif4e 14 197 IPR023398 -
Vium4185g00014 197 ProSitePatterns Eukaryotic initiation factor 4E signature. 76 99 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vium4185g00014 197 FunFam Eukaryotic translation initiation factor 4E 11 197 - -
Vium4185g00014 197 SUPERFAMILY eIF4e-like 8 190 IPR023398 -
Vium4185g00014 197 Pfam Eukaryotic initiation factor 4E 21 179 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4185g00014 Vium-Chr4185 192744 196951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4185g00014 1 197 Eukaryotic Initiation Factors Gene Family AT5G35620 63.415 5.56e-83 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4185g00014 K03259 - gmx:100499799 380.948