Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4161g00002 ATGGTATCAGGTGTTGATTTCTCCATCAACAAACACCTCTGCATCCATCACACCCTCCGCAAGCACTCAGAATCTCAGTCTTTCAAAAAACGCATTTCATGGAAGCAGGTGTATGATGTGACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGTTTTAGTGACCGCAACAGAGAAGGATGCCACCACTGATTTTGAAGATATTGGCCACAGTGAAGCAGCAGTTGAGATGATGGAGGCATACTTTGTTGGGGATGTTGACACCAACTCTATTCCAGCAGAACAAGCTCCCAAACACACTCCAAGCCCACCTACACTAGCACCTGCCTACAACAATCAATCTTTTGGATTTGTGAAGATATTGCAGTACCTGGTGCCATTGCTGATATTGGGCCTTGCATTTGCTCTGCAGTACTATGGCAAACAAAACAAGTCCACTGAATCAGAAAATTGA 456 0.4452 MVSGVDFSINKHLCIHHTLRKHSESQSFKKRISWKQVYDVTPFLDDHPGGDEVLVTATEKDATTDFEDIGHSEAAVEMMEAYFVGDVDTNSIPAEQAPKHTPSPPTLAPAYNNQSFGFVKILQYLVPLLILGLAFALQYYGKQNKSTESEN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4161g00002 151 PANTHER CYTOCHROME B5 35 142 - -
Vium4161g00002 151 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 19 88 IPR001199 -
Vium4161g00002 151 Gene3D - 12 91 IPR036400 -
Vium4161g00002 151 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 43 50 IPR018506 GO:0020037
Vium4161g00002 151 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 35 95 IPR036400 -
Vium4161g00002 151 SMART Cyt_b5_2 32 88 IPR001199 -
Vium4161g00002 151 Pfam Cytochrome b5-like Heme/Steroid binding domain 35 87 IPR001199 -
Vium4161g00002 151 PRINTS Cytochrome B5 signature 37 47 IPR001199 -
Vium4161g00002 151 PRINTS Cytochrome B5 signature 75 87 IPR001199 -
Vium4161g00002 151 PRINTS Cytochrome B5 signature 47 61 IPR001199 -
Vium4161g00002 151 PRINTS Cytochrome B5 signature 62 69 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4161g00002 Vium-Chr4161 3344 5004 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4161g00002 7 144 NADPH P450 reductases AT5G53560 46.154 3.30e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4161g00002 K23490 - gmx:100305546 179.489