Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4161g00001 ATTTCATGGAAGCAGGTGTATGATGTGACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGTTTTAGTGACCGCAACAGAGAAGGATGCCACCACTGATTTTGAAGATATTGGCCACAGTGAAGCAGCAGTTGAGATGATGGAGGCATACTTTGTTGGGGATGTTGACACCAACTCTATTCCAGCAGAACAAGCTCCCAAACACACTCCAAGCCCACCTACACTAGCACCTGCCTACAACAATCAATCTTTTGGATTTGTGAAGATATTGCAGTACCTGGTGCCATTGCTGATATTGGGCCTTGCATTTGCTCTGCAGTACTATGGCAAACAAAACAAGTCCACTGAATCAGAAAATTGA 363 0.4435 ISWKQVYDVTPFLDDHPGGDEVLVTATEKDATTDFEDIGHSEAAVEMMEAYFVGDVDTNSIPAEQAPKHTPSPPTLAPAYNNQSFGFVKILQYLVPLLILGLAFALQYYGKQNKSTESEN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4161g00001 120 PRINTS Cytochrome B5 signature 44 56 IPR001199 -
Vium4161g00001 120 PRINTS Cytochrome B5 signature 31 38 IPR001199 -
Vium4161g00001 120 PRINTS Cytochrome B5 signature 6 16 IPR001199 -
Vium4161g00001 120 PRINTS Cytochrome B5 signature 16 30 IPR001199 -
Vium4161g00001 120 Gene3D - 1 60 IPR036400 -
Vium4161g00001 120 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 57 IPR001199 -
Vium4161g00001 120 Pfam Cytochrome b5-like Heme/Steroid binding domain 5 56 IPR001199 -
Vium4161g00001 120 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 64 IPR036400 -
Vium4161g00001 120 SMART Cyt_b5_2 1 57 IPR001199 -
Vium4161g00001 120 PANTHER CYTOCHROME B5 4 111 - -
Vium4161g00001 120 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 12 19 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4161g00001 Vium-Chr4161 600 1409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4161g00001 5 113 NADPH P450 reductases AT5G48810 57.273 2.48e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4161g00001 K23490 - gmx:100305546 179.489