Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4142g00027 ATGTCATTGGTGTTGGTGGTATTGTTTTCCTCACGTGACATGAGTACCTGGGAGCTTCCTCATGGTTATGGCTGCGTAAGGCCAGGCCTGGTTGGATATGGACGGGGCATTATGGGATCAAAAGTTAGTGCAAACTGTAAACGCTTGTCAGGAACTAGTGTTACAGGTTTTGTAGTTATTGGTGTTGTATGTTTGCTTGTCAGCGTCATTCCTGAACCTGAGAGAAAAAGTATCTTAAACCAAGCGAGCATGAAACAAGCATTGGTTGAGGGTGCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATATGTATGTTCTCTTGTTTTACCTTTCTATTTTATTTGGTTTTAAGATATATCTTAATGGGACAGACAATTTACCATAG 393 0.4224 MSLVLVVLFSSRDMSTWELPHGYGCVRPGLVGYGRGIMGSKVSANCKRLSGTSVTGFVVIGVVCLLVSVIPEPERKSILNQASMKQALVEGAGPNMYEQGAGRVDMYVLLFYLSILFGFKIYLNGTDNLP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4142g00027 130 SUPERFAMILY Subtilisin-like 6 106 IPR036852 GO:0004252|GO:0006508
Vium4142g00027 130 Gene3D Peptidase S8/S53 domain 6 114 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4142g00027 Vium-Chr4142 259369 261938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4142g00027 6 106 Subtilisin-like Serine Gene Family AT5G19660 72.381 2.39e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4142g00027 K08653 - vum:124836885 258.455