Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4142g00025 ATGAAAGGAAAATTGGCAACAAAATCATTGGCATTTGATGTAAATGAAACGGAACCTATAATATGCTATGCAGCCACCATGATATCATCAGAAGGGCTTTGGCATAAGGAAAACCCCTTGAACTATTCTCTGCCTCTCTTTCTCTTGCAATTATTGTTAGTTCTCGTTGTCACCCGTCTATTCGTGTACATACTCAAGCCCATTCGCCAGCCACGCGTTATTTCTGAACTCATGGGAGGCATAATATTAGGTCCTTCGGTGCTTGGGAAAAACAAAACATTTTCCGATGCAGTTTTTCCGCAAAGAGGTGAAATCTTGCTTGAAGCAATGGCAAATGTTGGCATCGTATATTTTATGTTCTTGGTGGGAGTGGGGATGGATGCACAATCGTTAAGACGCATAGGTAGAAAAGCAGTGACCATAGCAGTTCTAGGAATGGTCCTCCCTTTCGCAATTGGAGCTCTCTTCGCTGTGTATTTGATCAAATTCGACGGAATATCAGAAAGAAGCACCGCTAACGTCCTATTCATTGGTTCGATTCTTTCTGTGGCAGCGTTTCCCGTTCTTGTGAGAATCCTTGCAGAGCTGAAATTCATCAACTCTGAGTTGGGAAGGATTGCTCTTTCATCTGCACTCGTCAATGATCTGCTTTCATGTCTGCTCTTGATTTTTTCTATTAATTTGGCACAGCGTAATAAGCCTTCTATCACTATGCTGTCGACTTTCTTGTCAAGTGTAGGGTTTATCGCTTTTAATATTTTTGTGGTGAGACCTGGAGTGTTGTGGATGGTAAGGAAAACCCCGGAGGGTGAAACGTTCAGTGATTTCTATATTTGCGTAATATTAGCAGGTGTGATGCTCTCAGGTTTGATCACAGATGCTATTGGAACCCATGCAGTTTTTGGAGCCTTTGTGTTTGGTTTGACAATCCCAAATGGACCTCTAGGGCTCTCTCTTGTGGAAAGACTTGAGGACTTTATAACGTTGCTTTTGCTCCCTCTATTTTTCGCCAGTAATGGCCTAAAAACTAATCTTGGACTGCTCGATGACTTCCGCGAATGGGTTATTTTGATTACTCTTGTTATTTTGACTAGCATTGGCAAAATCATTGGCACTATGGTCGCTGCATTCTATTATCAAATATCAGTTCGTGATGGAGCAGTCCTTGGTTTGCTCCTGAACACAAAAGGCGTTGTTGAAATTATTGTGATTAACATTGGCAAGGATAAAAAGGTTTTGAGCAGCGAATCGTTTGCAACCTTGATGCTTATAAGCATACTCATGACCGCAATCATTGTACCTGGGATGTCACTTATATCCAAACCAATGAGAGGAATGATACCTTACAAAAGAAGAACCATTCAAATGTCACAAAAAGAATCAGAGTTCAGAGTCCTAGTTTGTATCCACACTCCTCGAAATGTGCCGACAATGATTAACCTCCTTGACGCCACTAACCCTTCAAAGAGGTCCCCAATATGCATTTACTTGCTTCATTTGACCGAGCTCAGTGGCCACGCATCTGCGTTATTCCTTGTTCAACATCACACTGCCAAGGATCCAGACCAACCAGCCTATAACAAGACTGAAGCTCAATCCGAACACATAGTCAATGCCTTTCGAAACTACGAGCATCATGCTTTCCACGTCTCAGTGCAGCCCTCAACAGTAATCTCCCCTTACTCCACCATGCACGAGGACGTATGCAACTTGGCTCAGGACAAGCGTGTGGCCTTCATTATCGTCCCTTTCCACAAACATCAAGCGGTTGATGGCGAAATGGAGCCCACCAACATGTCACACCGAACTGTGAACCTCAATATTCTAAGCCAAGCACCTTGCTCCGTTGGGATTCTAGTGGATAGAGGGTTTAGTACGTGCAGCCATCTGGCTCCAGATCAAAAGTCTCGCAATGTGGCAGTGTTGTTCTTTGGAGGGCCTGATGATAGAGAAGCACTGAGCTATGCATGGAAGATGTCAGAAAATCCAGGGATAAACCTTACTGTGATGCGTTTTGTTCATGGAGAAGAAGTAATGCATCAACATAGTGACCTCAGCCCTGACGAAAGTACGGTACTAACAGTGAAAACGGATAAGGACTCTCAGAAGAAACTTGATGAGAGGCTTATAAGTTGGTTTAGGACAAGCTGTGAGGATGATGGCTCAGTTGTTTATGTCGAGAAAATGGTGAACAATGGAGAGCAGACAGTAGCAGCAATAAGGTCAATGGATGATATTCACGACCTTTTCATAATTGGGAGAAGCGAAGGAATGAAATCACCACTCATAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGTTAGGGGCAATTGGGGACTTGTTGGCTTCATCAGATTTTGCAGCCACTGCTTCTGTGTTGATAGTGCAGCAATATTTTGGGCAAGGAACGGAAGATGTGTTGGAAACAAACCAGGAGGAGGAGCAGACACTACCACCATGA 2463 0.4361 MKGKLATKSLAFDVNETEPIICYAATMISSEGLWHKENPLNYSLPLFLLQLLLVLVVTRLFVYILKPIRQPRVISELMGGIILGPSVLGKNKTFSDAVFPQRGEILLEAMANVGIVYFMFLVGVGMDAQSLRRIGRKAVTIAVLGMVLPFAIGALFAVYLIKFDGISERSTANVLFIGSILSVAAFPVLVRILAELKFINSELGRIALSSALVNDLLSCLLLIFSINLAQRNKPSITMLSTFLSSVGFIAFNIFVVRPGVLWMVRKTPEGETFSDFYICVILAGVMLSGLITDAIGTHAVFGAFVFGLTIPNGPLGLSLVERLEDFITLLLLPLFFASNGLKTNLGLLDDFREWVILITLVILTSIGKIIGTMVAAFYYQISVRDGAVLGLLLNTKGVVEIIVINIGKDKKVLSSESFATLMLISILMTAIIVPGMSLISKPMRGMIPYKRRTIQMSQKESEFRVLVCIHTPRNVPTMINLLDATNPSKRSPICIYLLHLTELSGHASALFLVQHHTAKDPDQPAYNKTEAQSEHIVNAFRNYEHHAFHVSVQPSTVISPYSTMHEDVCNLAQDKRVAFIIVPFHKHQAVDGEMEPTNMSHRTVNLNILSQAPCSVGILVDRGFSTCSHLAPDQKSRNVAVLFFGGPDDREALSYAWKMSENPGINLTVMRFVHGEEVMHQHSDLSPDESTVLTVKTDKDSQKKLDERLISWFRTSCEDDGSVVYVEKMVNNGEQTVAAIRSMDDIHDLFIIGRSEGMKSPLIAGLTDWSECPELGAIGDLLASSDFAATASVLIVQQYFGQGTEDVLETNQEEEQTLPP 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4142g00025 820 Pfam Sodium/hydrogen exchanger family 53 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium4142g00025 820 Gene3D - 484 766 - -
Vium4142g00025 820 Gene3D - 46 444 IPR038770 -
Vium4142g00025 820 PANTHER CATION/H + ANTIPORTER 21 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4142g00025 Vium-Chr4142 250707 253364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4142g00025 20 806 Antiporter Super Family AT2G13620 59.593 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4142g00025 K26731 - gmx:100779048 1114.75