Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium413g00002 ATGGTTCCTCCTGGCCCCCCTACGCCTCTTGGTGCCCAGTCTGTGCCGTCACTTTTGAGATCGAATTCCGGAATGTTGGGGGGTCAAGGTGGCCCTGTGCCTTCACAAACTTCGTTCCCTTCACTGGTTGCGCAGCGAAACCAGTTTAACAACATGAACATGATAGGTAATATGTCTAATGTAACTTCCTTATTGAATCAGTCTTTTCCGAATGGAATTCCGAATTCTGGACTAGCTGGCCATGGGAACAGCCAGCGCGGTGGAGGGGTTGATGTTGGGGCGGAATCGGATCCGCTGTCTGGTGTTGGCAGTGGAATCAATTTTGGCAATACTTTGCAATCGAATTTGGGTAACCCGGGTTCATCTGGTCAAGGTCAGAGTCAACAATTTTCAAATGCTTCTGGTAATCAGATGATGTCAGATCAACAGCATTCCCAGCAACTCGAACTTCAGAGTTTTCAGCATAGTCAACCATCAATGCAACAGTTCTCTGCTCCTCTGAACGCTCAGCAGCAACAACAGCATTTTCAGTCAATTCGTGGTGGAATGGGTGGTGTTGGATCGGTTAAGTTGGAGCCACAGGTAAACAACGACCAGTTTGGGCAGCAGCAGCAGCATTTGCCTTCAAGGAATCTTGCTCAGGTGAAGTTGGAACCTCAACAGCTTCAAACAATGAGAAACATGGCAGCAGTAAAAATGGAGCCTCAACATACTGATCAGCAGTTTTTGCATCAGCAGCAACAACAGCAGCAGCAACAGCAGCAACAACAACTTCTCCACATGTCAAGGCAATCGTCTCAGGCTGCTGCTGCTCACATGAATCATCTTTTACAGCAGCAGAGACTTTTGCAATATCAACAACATCAGCAGCAGCAACAGCAACAACAACAACTCTTGAAGGCAATGCCTCAACAACGACCCCATCTACCACAGCAGTTTCAACAGCAGAATATGCGGTCTCCTGTGAAGCCACCTTATGAACCTGGAATGTGTGCTAGGCGGCTGACCCATTACATGTATCAGCAACAGCATAGACCTGAAGATAATAACATTGAATTCTGGAGGAAATTTGTTGCTGAGTATTTTGCTCCGAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACTACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCGACTGCAGAGGTTCTGCCTAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTCTGGAAGAGCTCCTTTATGTTGACATGCCTCGAGAATACCATAATTCCTCTGGACAGATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAGCTTCGTGTTGTTCGTGATGGTCAGCTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGACATGAAGAGCTCATTCCTAGAAGACTGTTAATACCTCAGATTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCAATTACTCAAAATGCGACACCCAATTTATCGGTTCCAGAGTTACAAAGTAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCAAAAGCTTTGGAAGTTCCATTGGTCAATGATCTAGGATATACAAAGAGATATGTGCGGTGCCTTCAGATATCAGAAGTGGTAAATAGTATGAAAGACCTGATAGATTATAGCAGAGAAACACGAACTGGACCCATGGACAGCTTAGCAAAATTTCCTCGTAGAACAAGCGGTTCATCTGGACTTCATAGTCAGGCACAACAGTCTGAAGATCATTTACAGCAGCAGTCACAGCCTCAGCAGCCACTCCCGCATATGGTTCCCCATACTTCAAGTGGTGATAAAAATTCTGTGCAAACTGCTGCGATGCAGATTACTTCCACCAATGGTGTGACAAATGTAAATAATTCTGTCAATGCAGCATCTGCATCAACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAATTCTGTGAATTCTAGGCAAAATTCAATGAACAATGCAAGCAGTCCTTATGGGGGTAGTTCGGTTCAAATTCCATCCCCAGGTTCGTCTGGTAATGTTCCACAAGCGCAGCCAAATGCATCCCCTTTTCAATCACCCACACCATCCTCATCTAACAATCCACAAACATCTCATCCGGCATTAACTTCTGGAAACCACATGGGTGCGGCAAATTCACCTGCCAATATTCCCTTGCAACAACAACAGACTTCTCTCCCTGCTGAAGCTGACACGACGGATGCCCAGAGCTCAGTCCAGAAAATCATTCATGAAATGATGATGTCCTCCCAGATGAACGGCCCAGGTGGAATGGCTGGTTCTCTTGGAAACGACATGAAAAATGTAAACGGGATTCTACAAGGGAGTAACAATTCAGGGCTCAACAATAACGGTGGCCTTGTGGGTAATGGGGCTGTGAACAGTAATTCAGGTGTTGGGGTTGGTGGTTATGGCACAATGTGTCTTGGTCCATCGGGTATGAGCAATGGAATGAGACCTGTAATGGGACATAATTCCATAATGAATGGAAGGGGAGGACTGGCATCTCTTGCTCGCGAGCAAGTTATGAATCAGCAAGATTTGTCAACCCAACTACTTAGTGGGCTAGGAGCAGTAAATGGCTTTAATAATCTTCAATTTGATTGGAAACCATCTCCATGA 2724 0.453 MVPPGPPTPLGAQSVPSLLRSNSGMLGGQGGPVPSQTSFPSLVAQRNQFNNMNMIGNMSNVTSLLNQSFPNGIPNSGLAGHGNSQRGGGVDVGAESDPLSGVGSGINFGNTLQSNLGNPGSSGQGQSQQFSNASGNQMMSDQQHSQQLELQSFQHSQPSMQQFSAPLNAQQQQQHFQSIRGGMGGVGSVKLEPQVNNDQFGQQQQHLPSRNLAQVKLEPQQLQTMRNMAAVKMEPQHTDQQFLHQQQQQQQQQQQQQLLHMSRQSSQAAAAHMNHLLQQQRLLQYQQHQQQQQQQQQLLKAMPQQRPHLPQQFQQQNMRSPVKPPYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQLGAVAQKYQAITQNATPNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMDSLAKFPRRTSGSSGLHSQAQQSEDHLQQQSQPQQPLPHMVPHTSSGDKNSVQTAAMQITSTNGVTNVNNSVNAASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGSSVQIPSPGSSGNVPQAQPNASPFQSPTPSSSNNPQTSHPALTSGNHMGAANSPANIPLQQQQTSLPAEADTTDAQSSVQKIIHEMMMSSQMNGPGGMAGSLGNDMKNVNGILQGSNNSGLNNNGGLVGNGAVNSNSGVGVGGYGTMCLGPSGMSNGMRPVMGHNSIMNGRGGLASLAREQVMNQQDLSTQLLSGLGAVNGFNNLQFDWKPSP 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium413g00002 907 MobiDBLite consensus disorder prediction 75 149 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 234 270 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 1 39 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 294 321 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 592 636 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 294 326 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 238 270 - -
Vium413g00002 907 PANTHER LIM DOMAIN-BINDING PROTEIN 35 896 IPR029005 -
Vium413g00002 907 MobiDBLite consensus disorder prediction 103 149 - -
Vium413g00002 907 Pfam LIM-domain binding protein 334 588 IPR029005 -
Vium413g00002 907 MobiDBLite consensus disorder prediction 14 39 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 680 748 - -
Vium413g00002 907 MobiDBLite consensus disorder prediction 582 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium413g00002 Vium-Chr413 27767 39275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium413g00002 319 903 C2H2 Transcription Factor Family AT1G43850 63.562 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium413g00002 - - gmx:100798031 1373.99