Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4138g00007 ATGGCGTTATCTTGGCCAAACGTGCTGCAGTTTCGTTCTCAACCTTCTCTCGGACATGCTAACTTCGTCTTCTTCTCCGATCTCACCGAATCCCGTTCTGTGGAACTGTCGTTCACCGGTTCCCTCGCTCTGCTTCGTCGGTGCAAGATCTCCTGTCAGTCTCCAACAGCGCTGAAACCGGTGAAATGTCTCAGCAGATCCACGGAGGAGAAGCAGAGCGACACCGAAACCACTCTGTCCGACTCCGAGGAAGTTGTCGATGAACCAGATGACCGGAACCGAACTTCCGTTCTGGCAAACGGTCGTGTTGGTTCGCAGAGGATTGTCACCACGTTTTCAGGCGACTCTCTTTCTCTCGGAGTTCGAGAACCGGTTTATGAAGTAGTTGAAGTGAAGTCTAATGGGAAAGTGTCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAACCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGCATAGGGGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAGCAATGGAGGACCATCGATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAACGATTGGAGCAAAGATTGATGGAATTAGAACCTCGTGTACAAGCCCTTCTTGAGGCCTTGCCAAATAGGTTAACTGGTGACATATTGGAGCAGCTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGTTCCAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTTTGGAGGATCCTCATGAAATACGCCGTATGTGCATCATGGGAAGAAACTGCACACTTAATAAAGGAAACAATAATATGGAATGCTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCCTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAATTTGAGTTCACGAAGACTTGAGGTTAGCAGAGTAGAACTCCTTCTGCAGGTTGGAACATTCTGTGTGGCAGTAGGTGCCCTTGTAGCAGGTATATTCGGCATGAACCTGAAGTCCTATCTTGAGGAGCATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTGTTGGTGGAATTATTGCTTTCTTTCTAATGTATTCCTACCTCAGGGCGAGAAAAATATTTTGA 1368 0.4539 MALSWPNVLQFRSQPSLGHANFVFFSDLTESRSVELSFTGSLALLRRCKISCQSPTALKPVKCLSRSTEEKQSDTETTLSDSEEVVDEPDDRNRTSVLANGRVGSQRIVTTFSGDSLSLGVREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNSNGGPSMPFEIEVVEAALLSRIQRLEQRLMELEPRVQALLEALPNRLTGDILEQLRTSKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNNNMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4138g00007 455 MobiDBLite consensus disorder prediction 65 96 - -
Vium4138g00007 455 Pfam CorA-like Mg2+ transporter protein 335 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium4138g00007 455 Coils Coil 244 264 - -
Vium4138g00007 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Vium4138g00007 455 Gene3D Magnesium transport protein CorA, transmembrane region 204 386 - -
Vium4138g00007 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 84 454 IPR039204 -
Vium4138g00007 455 FunFam Magnesium transporter MRS2-11, chloroplastic 204 386 - -
Vium4138g00007 455 FunFam Magnesium transporter MRS2-11, chloroplastic 121 202 - -
Vium4138g00007 455 Coils Coil 331 355 - -
Vium4138g00007 455 Gene3D - 121 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4138g00007 Vium-Chr4138 51653 68045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4138g00007 119 455 MRS2 Gene Family AT5G22830 82.789 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4138g00007 K16075 - gmx:100808371 773.467