Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4136g00009 ATGAACCTATGGATTTCAGATTCAGCACCACCGAATCACCCACTAATAGAAAACATCCTTGGTGGAAACCTGAATGCATGGGACCTCTTCTCAAAAACAAAACACACAAAATCTAAACTCAAACATCATTTCATCTCTCTGTCAGAGCTCTTCCTCGGAATACTCCTAATCATGGCGGAGTGTGTGACGGACACGGCTCAGGCTGCTCTTTGCCGCAACAGCACCGCTGCAGCACATTTGAAAGTGATTTCCATCTTCACAATCTTCGTAACCAGCGTGATGGGTGTGTCCATGCCTGTCATGCTAGCACGATACTTTCAAGGAAAGTCTCTCTATGATATAGCTATCTTGGTAATCAAATGTTTTGCTGCGGGTGTTATTCTCGCCACCTCATTGGTTCATGTGTTACCGGACGCATTTGCCGCACTCTCCGATTGTCAGGTGGCATCGCAACATCCTTGGAAGGATTTTCCCTTTGCTGGCCTGGTGACTCTGGGTGGGGTTCTGCTGGCTCTGCTCGTGGACACTGTTGCCAGCTCTCACGTGGAGCATACGCACTACACGCCGGTGGAAACGGAGGAGAAGGAGGGTGGCGCTGGCTCATTGAGTATCGAGCTGGTAAGTGGCGGCGGTGGCGGCGGTGAAGCGGACAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAAGCTGGTGTCGCAGGTATTGGAGATAGGTATAATCTTTCACTCTGTTATCATCGGAGTGACTATGGGAATGTCCCAGAATGTTTGCACCATTCGCCCTCTCGTTGCTGCTTTGTCATTTCATCAGATTTTCGAAGGCTTAGGTCTTGGTGGTTGCATTGCTCAGGCAGGATTTGGATTTGGAACAACTGCATACATGTGCTTCATGTTCTCAGTGACAACACCGGTGGGAATAATTTTAGGAATGGTGTTATTCTCGGTGACGGGTTATGATGATAGTAACCCAAAAGCTTTGATCATGGAAGGATTACTGGGTTCAGTTTCTTCAGGGATACTGATTTACATGGCTCTTGTTGATCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGCTCAAAAAATTCTCTTTTCTTGCTCTAACTCTTGGCTCTGCTACTATGTCTGTTCTCGCACTTTGGGCCTGA 1161 0.4711 MNLWISDSAPPNHPLIENILGGNLNAWDLFSKTKHTKSKLKHHFISLSELFLGILLIMAECVTDTAQAALCRNSTAAAHLKVISIFTIFVTSVMGVSMPVMLARYFQGKSLYDIAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGVLLALLVDTVASSHVEHTHYTPVETEEKEGGAGSLSIELVSGGGGGGEADRVEELMRLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALSFHQIFEGLGLGGCIAQAGFGFGTTAYMCFMFSVTTPVGIILGMVLFSVTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKFSFLALTLGSATMSVLALWA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4136g00009 386 NCBIfam ZIP zinc/iron transport family 66 386 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium4136g00009 386 Pfam ZIP Zinc transporter 79 383 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium4136g00009 386 PANTHER ZINC/IRON TRANSPORTER 77 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4136g00009 Vium-Chr4136 101663 103222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4136g00009 58 386 Inorganic Solute Cotransporters AT2G30080 65.143 3.94e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4136g00009 K14709 - gmx:100784745 551.592