Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4118g00003 ATGGGAAAGTACATGAAGAAATCTAAAATCGCCGGTGACGTCGCCGCCCTAATCATGGAGTCACCGCCGCCGCACTCGCACCTTGGCGTCCGTACGCGCGCCAAAACCCTCGCGCTCCAGAACTCGCCCCAAACTCCCGACTCCGCCGCCTACCTCCAGCTCCGCAGCCGCCGCCTCCTCAAGATACCCCCTTCCATCCCGGAAAAGCCCCGTCGCTGTGCCGCCGCCGATTCTGCCTCCAATTCCCGCCTCTCCCAAACTGCGCTCTCCAAAACGCCGTCGTCCCGCTCCGCTGAAAAGTTCGCGCCTTTAGATGACGACAACGCTGAATGCTCCTTCGGCCAAAATTTCCTAGATGTCGAAGGCAGAGACGAAAGAAGCACTAGGGAAAGCACACCCTGTAGTTTAATAAGGGACCCAAATGTCATCCATACCCCCGGTTCAACTACAAGGCAAAGGACGCTCCAAATAAAGCATGATCACATACAAAGGAACATTCCACCGGCTCATGAGTTGGAGGAGTTCTTTGCTTATGCAGAGAAGCAGCAACAGAAAATGTTTATGGAAAAGTACAATTTCGACATTGTCAATGATGTACCACTGCCTGGACGGTACGAATGGGTCCCAGTACTCCACTAA 639 0.5399 MGKYMKKSKIAGDVAALIMESPPPHSHLGVRTRAKTLALQNSPQTPDSAAYLQLRSRRLLKIPPSIPEKPRRCAAADSASNSRLSQTALSKTPSSRSAEKFAPLDDDNAECSFGQNFLDVEGRDERSTRESTPCSLIRDPNVIHTPGSTTRQRTLQIKHDHIQRNIPPAHELEEFFAYAEKQQQKMFMEKYNFDIVNDVPLPGRYEWVPVLH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4118g00003 212 Gene3D p27 150 212 IPR044898 -
Vium4118g00003 212 PIRSF CKI_KRP_plant 1 212 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4118g00003 212 Pfam Cyclin-dependent kinase inhibitor 164 210 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vium4118g00003 212 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4118g00003 212 MobiDBLite consensus disorder prediction 64 102 - -
Vium4118g00003 212 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4118g00003 Vium-Chr4118 33741 36809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4118g00003 1 210 Core Cell Cycle Gene Families AT5G48820 43.852 5.21e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4118g00003 - - gmx:100782379 329.717