Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4114g00005 ATGTTTGCAGAAGAGAATGGCCTCAAGGGAGACCCCAGACTTCAAGCCATTTCTCAGGCCATCAGAGTCGTCCCTCACTTCCCCAAGCATGGAATAATGTTCCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGGGGATTCATGTTTGGTCCTTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTCCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGCTCTAGAATATGGGACAGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAACGGGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTCAAGTAGTGGAATGTGCTTGTGTCATCGGTGTGCCTGATGTCAAGGTAACCACTAATTATTTACCTTTCTCGGAAATTTCTATGCTGTTCAAGCTCACCACCACGAGTCACCAGTTTAGTACATCTCAGTGCATGCTTAACAACAACATTTTCAACTTCTGCATAATGCCAAACACCAAAAAGGATTCCTCTATCAGATGTTAA 663 0.454 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAQVVECACVIGVPDVKVTTNYLPFSEISMLFKLTTTSHQFSTSQCMLNNNIFNFCIMPNTKKDSSIRC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4114g00005 220 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vium4114g00005 220 CDD PRTases_typeI 51 184 IPR000836 -
Vium4114g00005 220 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 170 - -
Vium4114g00005 220 SUPERFAMILY PRTase-like 20 189 IPR029057 -
Vium4114g00005 220 Hamap Adenine phosphoribosyltransferase [apt]. 17 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vium4114g00005 220 Gene3D - 6 178 IPR029057 -
Vium4114g00005 220 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Vium4114g00005 220 NCBIfam adenine phosphoribosyltransferase 18 175 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4114g00005 Vium-Chr4114 30656 33547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4114g00005 11 168 PRT Gene Family AT1G27450 72.785 1.70e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4114g00005 K00759 - gmx:100499904 333.183