Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4114g00004 ATGTTTGCAGAAGAGAATGGCCTCAAGGGAGACCCCAGACTTCAAGCCATTTCTCAGGCCATCAGAGTCGTCCCTCACTTCCCCAAGCATGGAATAATGTTCCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGGGGATTCATGTTTGGTCCTTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTCCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTGATTTCAGAAAAATATGCTCTAGAATATGGGACAGATTGTTTGGAGTTGCATGTTGGTGCTGTCCAGCCGGGTGAACGGGCCATAGTAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGTGCTCAAGTAGTGGAATGTGCTTGTGTCATCGGTGTGCCTGATGTCAAGGGGCAGTGCAGGCTCATTGGAAAGCCACTTTATGTTCTTGTTGAGCCGCGTAAAGCAGATAAATGTTATTAA 576 0.4722 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAQVVECACVIGVPDVKGQCRLIGKPLYVLVEPRKADKCY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4114g00004 191 Gene3D - 6 184 IPR029057 -
Vium4114g00004 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
Vium4114g00004 191 CDD PRTases_typeI 51 183 IPR000836 -
Vium4114g00004 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Vium4114g00004 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vium4114g00004 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vium4114g00004 191 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Vium4114g00004 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4114g00004 Vium-Chr4114 29775 33547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4114g00004 11 183 PRT Gene Family AT1G27450 69.942 5.33e-90 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4114g00004 K00759 - gmx:100499904 377.096