Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4110g00001 ATGAACAACACCATATTTTTCTTTTTTTCTACTCTTTTCCCACGCACCCTTCGTTTTCTACCGTTGCATTTCCATCCTTTCTTCTTTCACCTTTGCTATTTCCTCGTCCTTTCTGTCTTAGGTTTTCTCGGTCTCAAGGTTTCAATGCCAAGGACCCCTTCTAGCCCTAATGACTTGGACCTCTTCTACACCTCAGTTTCTGCTTCCACAACTTCTAGCATGGTAGCCCTAGAAATGGAGCTTTTCTCCAATTTTCAATTTATTCTCCTCACCCTCCTCATGTTTCTTGGTGGGGAAGTTTTCACTTCCATGCTCGATCTTCTACTTGCTAGGAATAAACTCATCCAAAACAAATTACGTAGCATCAATCCTTCTTCACCCTCGGATGAGTCCCCGACCAATGCCACTCATATTGAGCTTGCCTTAGTTTCTATTCCTCACTCAGAATCACAAAACCAGACACTGTCTGATAATGTTGCATCCGTTAGACTTAAGTATAACTGTCTTCGTTATCTGACTTACGTGGTGTTAGGTTACTTTGTTGTGGTTCAGTTTGTTGGATTTAGTTTGGTGTCTTTGTATATGACAGTGGTAGCGAGTGCAAGACAAGTACTGCGAAAGAAAGACATTAAAGTTGTAACATTTTCTTTGTTTACCGTCGTTTCCACTTTTGCCAGTTGTGGCTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGTCTTCTCCTCCTTCTTCTCCCACATGTGTTTCTGGGCAACGCCCTGTATCCACCGTGTCTGACACTTGTGCTAATGGTTTTGGAAAAAGTTACCAGAAAAGAGGAATTCTCACAGTTGCTGAAGAATTCCAACAACCTCGGCTATAGACATTTGCTCTCTGTTTATCGTTGTTGTCTCCTGGTTGGTACAGTGTTTGGTTTGAACGTTATACAGTTTGTGATGTTTTGGTCCGTTGAATGGAACTCCGAAATCATGGAGGGTCTGAATTTGTATGAGAAAGTGGTAGCGTCATTGTTTCAAGTTTCAAACGCCAGACACGCCGGTGAATCTGTTTTTGATCTCTCTTCCATCTCTTCAGCCATATTAGTACTCTTCATTGTGATGATGTACCTTCCGCCATATACTACATTTTTACCTGTAAAGGAGGAGGAAGATGACGCCAAGAGAAAAAGAAAAAGCGCAGTGGAGTGTGTTGTATTTTCTCAGCTCTCTTACTTAGCCATTTTCATCATTCTGGTATGCATGACAGAGAGCAAAAGCTTGAAAGAGGATCCACTCAACTTTAACGTGCTCAGCATCACCCTCGAAGTCATAAGTGCTTATGGGAACGTAGGGTTCTCCATGGGATACAGCTGCGCAAGGCAGTTGAAAAGAGATGGTAGCTGCAAAGATTCATGGGTTGGATTTTCTGGAAGATGGAGCAACAAAGGAAAGTTCATCCTTATATTGGTCATGTTCTTTGGGAGGCTCAAGAAGTTCAACATGAAAGGTGGCAAAGCGTGGCACCTCTCTTAG 1527 0.425 MNNTIFFFFSTLFPRTLRFLPLHFHPFFFHLCYFLVLSVLGFLGLKVSMPRTPSSPNDLDLFYTSVSASTTSSMVALEMELFSNFQFILLTLLMFLGGEVFTSMLDLLLARNKLIQNKLRSINPSSPSDESPTNATHIELALVSIPHSESQNQTLSDNVASVRLKYNCLRYLTYVVLGYFVVVQFVGFSLVSLYMTVVASARQVLRKKDIKVVTFSLFTVVSTFASCGFVPTNENMMVFKKNSGLLLLLLPHVFLGNALYPPCLTLVLMVLEKVTRKEEFSQLLKNSNNLGYRHLLSVYRCCLLVGTVFGLNVIQFVMFWSVEWNSEIMEGLNLYEKVVASLFQVSNARHAGESVFDLSSISSAILVLFIVMMYLPPYTTFLPVKEEEDDAKRKRKSAVECVVFSQLSYLAIFIILVCMTESKSLKEDPLNFNVLSITLEVISAYGNVGFSMGYSCARQLKRDGSCKDSWVGFSGRWSNKGKFILILVMFFGRLKKFNMKGGKAWHLS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4110g00001 508 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 22 508 - -
Vium4110g00001 508 Pfam Cation transport protein 165 375 IPR003445 GO:0006812|GO:0008324|GO:0055085
Vium4110g00001 508 Pfam Cation transport protein 398 459 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4110g00001 46 507 Inorganic Solute Cotransporters AT4G10310 50.316 2.66e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4110g00001 K24976 - gmx:100797835 686.797