Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4098g00003 ATGGACCAGTCTCTGCTGAGAGGCGAAAGCAGTGGCCTCAGCTCCCGCCGGCGAGGACTGTTCCGGCGTTCCGACGCTATAACCTACGGTTCCAACTACGAGAAAGCCGCTGCGCTCATTGATCTGGCTGAAGATGGTGTTGGTCTCCCTGAACAAATTCTTGATTCATCAAACTTCCAAAATTATGCAAGATTTTATTTTGTATTCATTAAATGCAATCTCATATGGTCTCTTAGTTATTTTGCTTTGATAGTCCTGAATTTCCTGGAGAAACCTCTGTGGTGTAAAAAACTCGCCACACATTCCTGCAACGATAGAGAGTATTTCTATTTGGGTCAATTGCCGTATCTAACTGATGCAGAATGTCTTATTTATGAGGCAATAACTCTTCTTGTGCTAATCATACATACTTTCTTCCCATTGTCATACGAAGGATCTCGTATATATTGGAAAAGTACTTTTAATCAATTGAAGGTATGTTGCTTCAAGATCCTACTAAAGAATATAATATGGTAG 516 0.405 MDQSLLRGESSGLSSRRRGLFRRSDAITYGSNYEKAAALIDLAEDGVGLPEQILDSSNFQNYARFYFVFIKCNLIWSLSYFALIVLNFLEKPLWCKKLATHSCNDREYFYLGQLPYLTDAECLIYEAITLLVLIIHTFFPLSYEGSRIYWKSTFNQLKVCCFKILLKNIIW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4098g00003 171 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 3 170 IPR044581 GO:0005245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4098g00003 1 170 Ion Channels AT4G03560 56.471 8.25e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4098g00003 K16900 - vum:124836709 329.331