Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4091g00007 AAAGAATTTAAACTCGTAAAGAAGACACAGCTGAGCCACAACTCTGCAAGATTCAGATTTGCCCTTCCTACTCCTTCTTCAATATTAGGTCTTCCTGTTGGAAACAACATACTTGTTAGAGGAAGAGATAGCCAAGGAGAAGAAGTTCTGAGATCATATACTCCAATCACGTTGGATTCAGATGTTGGGTACTTCGAGTTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGTGATTATTTGGCTGTGAGGGGTCCAAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTCGGAATGATTGCAGGAGGCTCAGGCATAACTCCTATGTTTCAGCTCATAAGAGCCATTCTAGAAAACCCTAAAGACAAAACAAAGGTGCATCTCATTTATGCCAATGTAACAGTGGATGACATTTTATTGAAGGAAGAACTAGATAATTTTGCCGAAAAATTTCCTCAAAGATTTGAAGTATATCATGTTCTTAATAAGCCTCCTCAACAATGGAATGGTGGCATTGGGTTTGTATCGAAGGAGATTATTAAATCACATTGCCCTGAACCAGCAAAAGATATTCAGATACTAAGGTGTGGTCCACCAGCAATGAACACAGCCATGGCTACTCACCTTGATGCACTTGGCTACACATCAGACATGCAGTTCCAATTCTAA 705 0.4057 KEFKLVKKTQLSHNSARFRFALPTPSSILGLPVGNNILVRGRDSQGEEVLRSYTPITLDSDVGYFELVVKMYPNGKMSHHFRQMKEGDYLAVRGPKGRFSYKPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVHLIYANVTVDDILLKEELDNFAEKFPQRFEVYHVLNKPPQQWNGGIGFVSKEIIKSHCPEPAKDIQILRCGPPAMNTAMATHLDALGYTSDMQFQF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 87 101 - -
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 110 129 - -
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 51 58 - -
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 148 159 - -
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 204 212 - -
Vium4091g00007 234 PRINTS Cytochrome B5 reductase signature 29 40 - -
Vium4091g00007 234 Pfam Oxidoreductase NAD-binding domain 111 217 IPR001433 GO:0016491
Vium4091g00007 234 Gene3D - 91 234 IPR039261 -
Vium4091g00007 234 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 234 IPR001834 GO:0016491
Vium4091g00007 234 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 90 229 IPR039261 -
Vium4091g00007 234 CDD cyt_b5_reduct_like 3 234 - -
Vium4091g00007 234 FunFam NADH-cytochrome b5 reductase 92 234 - -
Vium4091g00007 234 FunFam NADH-cytochrome b5 reductase 1 92 - -
Vium4091g00007 234 Gene3D Translation factors 1 90 - -
Vium4091g00007 234 Pfam Oxidoreductase FAD-binding domain 3 101 IPR008333 -
Vium4091g00007 234 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 1 102 IPR017927 GO:0016491
Vium4091g00007 234 SUPERFAMILY Riboflavin synthase domain-like 2 103 IPR017938 -
Vium4091g00007 234 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 148 159 IPR001709 GO:0016491
Vium4091g00007 234 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 110 129 IPR001709 GO:0016491
Vium4091g00007 234 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 204 212 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4091g00007 Vium-Chr4091 53885 66696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4091g00007 1 234 NADPH P450 reductases AT5G17770 70.513 4.03e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4091g00007 K00326 - gmx:100809584 448.743