Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4088g00003 ATGGATCTGGAGTCTGTGATCTACAAAAACTCTTTTAAGGATGGATCATGGAAGACAGTGTTAACATTGGCTTATCAGAGCTTAGGAGTTGTGTATGGCGATTTAAGTACATCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAGCATTCAGAGACCAATGAAGAGATATATGGAGTGTTGTCTTTTGTGTTCTGGACTCTCACACTGGTTCCACTCCTCAAGTATGTCTTCATTGTGCTCAGAGCAGATGACAATGGAGAAGGAGGGACTTTTGCTCTGTACTCTCTTCTATGCAGGCATGCTCAGGTGGGGTTGTTGCCTAATGTTCAGCTTGCAGACGAAGAACTAACTGAGTACACCAAGGATGGAACAGTGCCAATTGATAAGAAGAATGTTGGGTTGGGGTTGAAATCGGTGTTCGAGAAACACAAGGTTCTGCAGAGGGTGCTGCTTGTTCTGGCTCTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTTACACCTGCTATTTCTGTTTTCTCTGCCGTGTCAGGGTTGGAGCTTTCTATGTCTAAAGAACAGCATAGGTATGTTGAAGTACCAATTGCTTGTGTGATACTGATTTTTTTGTTTGCACTTCAACATTATGGAACACATTGCGTGGGGTTTCTATTTGCTCCTGTTGTGTTGACCTGGCTACTATGCATTAGCTGTATCGGTATGTATAATATCTTACATTGGAATCCTCATGTTTATGAGGCTCTCTCTCCCTACTACATGTTCAAATTTCTGAAGAAGACTCAAAGAGGAGGTTGGATGTCCTTAGGGGGAATTCTACTGTGTATAACAGGTTCTGAAGCCATGTTTGCTGATCTAGGGCACTTTTCACAGTTGTCGATTAAGATTGCTTTTACTTTTCTGGTATACCCTTCTTTAATTCTGGCATATATGGGACAAGCTGCATATCTTTCCAAGCATCATACTATTGAAAGTGATTACCGAATTGGGTTCTACGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCAATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACACGGCCAGATTTATATCCCAGAGATCAACTGGTGTTTGATGCTACTTTGCCTTGCTATTACTGTTGGTTTTAGAGATACAAAACGCATGGGAAACGCATCAGGCTTGGCTGTCATAACTGTGATGCTGGTCACCACTTGCTTAATGTCTCTAGTTATTGTTTTATGCTGGCACAAGAGTATTTTCCTAGCCATTTGCTTCATATTCTTCTTTGGGTCCATCGAAGCACTGTACTTCTCTGCATCCCTGATCAAGTTCCTTGAAGGAGCATGGGTGCCCATTGCCCTCTCGCTCACATTTCTTATCGTGATGTATGTGTGGCACTTTGGCACACTTAAAAAGTACGAGTTTGATGTTCAGAATAAGGTGTCCATCAACTGGCTCCTTGGTTTAGGCCCCACTCTAGGAATTGTGCGTGTAAGAGGAATTGGCCTAATACACACTGAACTTGTGTCTGGGATCCCAGCCATTTTCTCTCACTTTGTCACCAATCTCCCAGCTTTTCATCAAGTAGTGATCTTCCTCTGCGTCAAATCTGTCCCAGTGCCACATGTGAGACCTGAAGAAAGGTTCTTGGTTGGTAGAGTTGGCCCAAAAGAATACAGGCTTTATAGGTGCATAGCTCGGTATGGTTATAGGGACTTTCACAAGGATGACATTGAGTTTGAGAAAGATCTTATTTGTAGCATAGCAGAATTCATTCGGTCAGATAGTTCTGAGTCCAACCAAGGATTTGAGAGTTTTGAAGATGACACAAAAATGGCAGTTGTAGGAACCTCAGCATCAAATTCAGAAGGTATAAGGATGTGTGAAGATGATAACAAAAATTCTCAGATGAAAGATTGCATAGAAATGAGGGTGGTTAAGTCTCCTGAAATAGTTAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCAGAGATTGATTTGGGTGCAAGGGAGGAGTTGCAGGAACTAATGCAAGCAAGGGAAGGAGGAATGGCATTCATAATGGGCCACTCTTATGTGAAAGCAAAGAGAGGTTCAAGTTGGATAAAGAAAGTTGTGATCAATTATGGGTATGATTTCTTAAGAAGAAATTCTAGAGGACCAACTTATGCTCTAAGTATCCCTCATGCTTCTATCCTAGAAGTTGGCATGGTCTACCATGTCTGA 2328 0.4205 MDLESVIYKNSFKDGSWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPNVQLADEELTEYTKDGTVPIDKKNVGLGLKSVFEKHKVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPIACVILIFLFALQHYGTHCVGFLFAPVVLTWLLCISCIGMYNILHWNPHVYEALSPYYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHTIESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSLTFLIVMYVWHFGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDFHKDDIEFEKDLICSIAEFIRSDSSESNQGFESFEDDTKMAVVGTSASNSEGIRMCEDDNKNSQMKDCIEMRVVKSPEIVRKRVRFVVPDSPEIDLGAREELQELMQAREGGMAFIMGHSYVKAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASILEVGMVYHV 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4088g00003 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4088g00003 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4088g00003 775 NCBIfam potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4088g00003 Vium-Chr4088 40223 46535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4088g00003 1 773 Inorganic Solute Cotransporters AT5G14880 76.795 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4088g00003 K03549 - gmx:100793387 1382.08