Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4075g00010 ATGGAACTTTTTAAGATTCTTTTTGTCTTTCTCATCACTCTGCTACTCATCTTCAAGCTCGCACTCTCTTTCTGGTGGAGACCAAGGAAAATTGAAGCCCATTTCTCCGACCAAGGAATAAGAGGACCTCCTTATCGTTTCTTCCTCGGAAATGTTAAAGAACTTGTCGGAATGATGATGAAAGCCTCTTCCCAACCCATGCCTTTCTCTCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAACAAAATTTATGGTTCGACGTTCCTGGTTTGGTTTGGACCCACCGTTCGAGTCATCATCTCTGATCCAGACCTCATCCGAGAAATCTTGATCTCCAAGTCAGAATTCTACGAGAAAAACGAATCTCCCCCACTTGTCAAGCAGCTTGAAGGTGATGGGCTCCTGAGCCTAAAAGGAGAAAAATGGGCTCACCACCGAAGAATCATCTCTCCCACCTTTCGTATGGAGAATCTCAAATTGTTGATACCGAATATGGCAACAAGCGTGGTTGAGATGTTGGAGAAGTGGAAGACAATGGCCGAGAAGGGTGAAGTGGAAATCGAAGTTTCAGAATGTTTTCAAACCTTAACAGAAGATGTAATAACTAGGACAGCGTTTGGAAGCAGCTACGAAGACGGGAAAGCCGTTTTCCGGTTACAAGCCCAACAAATGGAACTGGCAGCCGATGCCTTCCAAAAAGTGTTCATTCCAGGTTCCAGATTCTTTCCGACGAGGAGGAATTTAAATTCTTGGAGATTGGATAAGAAAATGAAGAGATCATTGGTGAAGTTGATCGATAGACGAAAAGAGAATGCGTGTGGGAATGAAATTACGAAAGGAGCGAAGGATTTGCTGGGGCTTATGATTGGAGCTTCCGTAACGGTGGATGACATGGTGGAAGAGTGCAAGACATTTTTCTTTGCAGGGAAACACACAACTTCCAACATGCTGACGTGGAGCACTATTCTGCTTGCTATGCATCCGAAGTGGCAGGTAGAGGCACGTGAGGAGGTGGCGATGGTGTGCGGTGCACGTGGCATCCCTACCAAGGACGATATCGTCAAGCTTAAGACATTGACGATGATCGTGAACGAGTCTCTAAGGCTGTACCCTCCGACCATCGCAACCATCAGAAGGGCCAAAGCTGACGTGGAGCTAGGGAAGTTGAAGATCCCGTGCGGGACGGAGCTTCTGATCCCCATCTTGGCCGTTCATCACGATCAGGCCACGTGGGGCAGCGACGCGAACGAGTTCAATCCTGGCCGTTTCTCCAACGGCATGTCTCGCGCTGCGCGCCACCCTTTTGCATTCATCCCCTTCGGGCTCGGTGCGCGAACCTGCGTGGGACAGAACCTGGCGCTTCTTCAAACGAAACTGACCCTGGCCATCATGCTTAGCCGTTTCAGTTTCAAATTGGCCCTTACCTATCGCCACGCGCCAACGGTCCTCATGTTGCTCTACCCTCAGTATGGCGCGCCGATCATTTTCCAACCCATTGCCACAACCGCAACCACCGTGGATTGTTGA 1539 0.4899 MELFKILFVFLITLLLIFKLALSFWWRPRKIEAHFSDQGIRGPPYRFFLGNVKELVGMMMKASSQPMPFSHNILPRVLSFYHHWNKIYGSTFLVWFGPTVRVIISDPDLIREILISKSEFYEKNESPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFRMENLKLLIPNMATSVVEMLEKWKTMAEKGEVEIEVSECFQTLTEDVITRTAFGSSYEDGKAVFRLQAQQMELAADAFQKVFIPGSRFFPTRRNLNSWRLDKKMKRSLVKLIDRRKENACGNEITKGAKDLLGLMIGASVTVDDMVEECKTFFFAGKHTTSNMLTWSTILLAMHPKWQVEAREEVAMVCGARGIPTKDDIVKLKTLTMIVNESLRLYPPTIATIRRAKADVELGKLKIPCGTELLIPILAVHHDQATWGSDANEFNPGRFSNGMSRAARHPFAFIPFGLGARTCVGQNLALLQTKLTLAIMLSRFSFKLALTYRHAPTVLMLLYPQYGAPIIFQPIATTATTVDC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4075g00010 512 Pfam Cytochrome P450 78 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 FunFam Cytochrome P450 734A1 25 504 - -
Vium4075g00010 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4075g00010 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 496 - -
Vium4075g00010 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4075g00010 Vium-Chr4075 89196 92763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4075g00010 5 501 Cytochrome P450 AT2G26710 72.962 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4075g00010 K15639 - gmx:100786200 854.358