Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4070g00014 ATGGAAGAAACATTTGTACCCTTTGAAGGAATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACGGGTGGACTCAAAGCAGGTTTAAGGATTTGGGCGCCCACCACATACATATTCTTTGCTTCGGCAATACCGGTCATTTCGTTCGGGGAACAACTAGAGCGAGATACTGACGGTGTTCTAACTGCTGTTCAAACATTGGCATCCACTTCGATATGTGGCATCATACACTCAATCCTTGGAGGTCAACCTCTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGGATTTGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCAGTGTTGCTATTCCTGCTGGCCATCTTGGGAGCTTGCTCTATAATCAACAGGTTTACCCGTATTGCAGGAGAGTTATTTGGCATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTCGTGGATGAGTTTCGCATACCACAACGAGAAAATCCAAAATCAGTTCAGTTCATACCTTCATGGAGGTTTGCTAACGGGATGTTTGCTTTAGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAGAAGCAGAAAGGCCAGGTCATGGCGCTATGGTTCTGGTTGGCTTCGCAGCCTAATAGCAGACTATGGTGTGCCACTTATGGTCCTAGTTTGGACAGGTGTATCCTACCTGCCTTCTGGAAGTGTTCCACATGGTATTCCAAGGCGCCTGTTCAGCCCGAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTGTTAAGGATATGGTTCATGTTCCTGTTGTCTACATAATTGGAGCATTTATCCCAGCCACTATGATTGCTGTGCTTTATTACTTTGACCACAGTGTAGCATCCCAGCTTTCCCAGCAGAAGGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTACGACTTGCTCCTTTTGGGATTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCAGCAAATGGAGTTATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGGAACAAACTGGTGGTAACCGCACGAAAAAGTATGGGAAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGGTAGAAGTATACCATCAAATGCAGACGCCTCTTATTTACCAGGATCCCTCTGCTCGAGCACAAGGACTAAAAGAACTTAAAGAATCAACTATTCAAGCAGCTACCAGTATGGGAAACATGGATGCCCCAGTTGATGAAACTATATTTGACGTTGAGAAAGAAATAGATGATTTGCTGCCTGTGGAGGTTAAGGAACAGCGTCTGAGTAACTTGCTTCAAGCAATAATGGTGGGAGGATGCGTTGCAGCCATGCCTGTCCTCAAGAAAATACCAACCTCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAATTCTGGGAAAGGATCTTATTGCTCTTCACTGCACCAAGCAGAAGATACAAGGTTCTTGAGGATTACCATGCTACTTTTGTAGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCATTTACCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTCCCCATGATGATCATGCTCTTAGTTCCTGTGAGACAGTACTTTCTCCCCAAATTTTTCAAGGGGGCACACCTTCAAGACTTGGATGCAGCAGCGTATGAAGAGCAAACAGCTTTGCCATTCAACCTTGCAACGCAATCAGAGTTTGGAGGTGGTGCTTCTCATGTTGGAGAAGGTGAGATCCTAGATGAAGTTATCACAAGAAGCCGTGGCGAGTTTAGGCACACCAGCAGTCCAAAGATCACAAGCTCCACCCCAACACCAAAAACTGATCCTAGAAGCCATCTAAGCCCACGTCTCTCGTTTAGTTCACGCGTGGGTGAGCTGAAAACTGAGCAAAGTCCTCGATCTGGTGCAAGAGGTTCCCTCAGTCCAAAGGCTGGAGAAGTGAGACTATCAAATCTGGGAAGAAGTCCTCTTAATCAGGATTCAAAACAGCAGGACCACAACTAA 2172 0.4507 MEETFVPFEGIKNDLRGRLMCYKQDWTGGLKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRDLFLAWTGWVCVWTAVLLFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPQRENPKSVQFIPSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYLPSGSVPHGIPRRLFSPNPWSPGAYENWTVVKDMVHVPVVYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVVTARKSMGKNASLGQLYGNMVEVYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQTALPFNLATQSEFGGGASHVGEGEILDEVITRSRGEFRHTSSPKITSSTPTPKTDPRSHLSPRLSFSSRVGELKTEQSPRSGARGSLSPKAGEVRLSNLGRSPLNQDSKQQDHN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4070g00014 723 MobiDBLite consensus disorder prediction 641 723 - -
Vium4070g00014 723 MobiDBLite consensus disorder prediction 649 693 - -
Vium4070g00014 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vium4070g00014 723 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Vium4070g00014 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Vium4070g00014 723 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4070g00014 Vium-Chr4070 96619 101162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4070g00014 1 694 Antiporters AT3G62270 82.734 0.0 1175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4070g00014 K24194 - gmx:100776705 1377.84