Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium405g00001 ATGAGTGATGTGGAAGGGATGGTGAAAAAGAAGGTGGGAAAAGGGCTCATCACCAAAACGTTGGAGCGATGCAAGTGGATAGGACGAGGCAAAAGCAGCATGATGATGATGAGGAGCAGATCCTGGCCCAGCCGCAAGGGAGCAAAGAAGACCGGCAGCAGCAACAGCAACAGCAGTTGTGTGGCACCCGAAGGTTGTTTCTCCGTCTACGTTGGACCACAAATGCAGAGGTTCGTTATCAAGACCGAGTACGCTAATCACCCTTTGTTCAAGATTCTTCTGGAAGAAGCAGAATCGGAGTATGGGTACAGCAGCCAAGGTCCTTTGGCTCTTCCCTGCCAGGTTGATATCTTTTACAAGGTGTTGATGGAAATGGAGTATTCTCGTGAAGAACAAGAGGAGCAACAGAGACTAACTCGTAAAGCTTCTGCTGGCTGTGTCTGTCTGAACCGCTCTCCCTCCGCTTATCGCCTTCTTCGTTCTTCCTCCGTCAAGCCATAA 501 0.499 MSDVEGMVKKKVGKGLITKTLERCKWIGRGKSSMMMMRSRSWPSRKGAKKTGSSNSNSSCVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKILLEEAESEYGYSSQGPLALPCQVDIFYKVLMEMEYSREEQEEQQRLTRKASAGCVCLNRSPSAYRLLRSSSVKP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium405g00001 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 49 122 IPR003676 GO:0009733
Vium405g00001 166 Pfam Auxin responsive protein 38 122 IPR003676 GO:0009733
Vium405g00001 166 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium405g00001 Vium-Chr405 2805 3641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium405g00001 50 122 Calmodulin-binding Proteins AT3G43120 43.750 7.58e-20 79.3