Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4034g00004 ATGAGCAAACCCAAAACCCAAAGAAAACCAACCATTACCAAACATGTCAGCCAAAACCAAAACCAAGAGCTACAGAAAACAGAAAAACAACCTTCATGGGTGGTAAGAGGCCTGTTGGCTTGTAGGAATGTTCAAATCCAGCAACATCAGCAGCAGCAGCAGAAGGAAGCAAAACCACCTCCAGAAGCAAAAGATCATCAACACAGGAAAAAACAGGAACAGAGAAAGCTGCAAGAGGAAAGAATCCCGGAAGATAACAGCAAGAAGTGCAAGAAGATGAAGTGCTCAGGTTCGCTTTGTAACAACACCAAGATCACGGCAAAGCCGGACACATCAACCCCAGATATCCACAAGAAAAGGTTGTTTCTAAATGGATGCAACAGCAACGATGCTTCCAGCAGATCCATGAAAGCACCTCTTACCGAACACAATGGACCCGTTTCAGCTTCTTCCTCTTCATTGTCAGCATCTTCCAGTTCTTCTGGCGCTGGCTCTTTCAGGGGAATGCCATTCAGGAGACTTTCTGGCTGTTATGAGTGTAGAATGGTGGTAGACCCGGTTCTAGGCTTCACTAGAGATCCTTCTCTCAGGAGTAGCATTTGTTCTTGTCCCGACTGTGGCGAGATCATGAAAGCTGAAAGCTTGGAGCATCACCAGGCAGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGACACCAGCAAGAACATAGTTGAAATAATATTCCACTCCAGCTGGCTGAAGAAGCAATCTCCAGTGTGCAAAATAGACCGCATCCTCAAGGTCCACAACACCCAGAAAACCATTACCAGATTCGAAGAATACAGAGATTCCATAAAAGCAAAGGCCACGAAACTCCCCAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTACTCAGGTTTCACTGCACCTCCTTCGCGTGTTCTCTAGGCCTAAACGGGTCCTCCAACTTGTGCAACTCCGTTCCACAGTGCAACATTTGCAGCATAATCAAGCACGGGTTCAAGGTTACCGGAGGAAGCGGTATCTTGACAACGGCAACGAGTGGGAAGGCTCACGACAAGGCGTGTGTGGATGAGAGTGAAGAGAAGAGAGCAATGCTGGTTTGTCGGGTTATAGCAGGAAGGGTGAAGAAGAATGCAGAAGGAGGCATGGAGGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCCAATTTGGATGAGTTGGTTGTATTCAACCCAAGAGCCATTTTGCCTTGCTTTGTTGTAATCTATAGTGGCTTTTGA 1278 0.4703 MSKPKTQRKPTITKHVSQNQNQELQKTEKQPSWVVRGLLACRNVQIQQHQQQQQKEAKPPPEAKDHQHRKKQEQRKLQEERIPEDNSKKCKKMKCSGSLCNNTKITAKPDTSTPDIHKKRLFLNGCNSNDASSRSMKAPLTEHNGPVSASSSSLSASSSSSGAGSFRGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIMKAESLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTITRFEEYRDSIKAKATKLPKKHPRCIADGNELLRFHCTSFACSLGLNGSSNLCNSVPQCNICSIIKHGFKVTGGSGILTTATSGKAHDKACVDESEEKRAMLVCRVIAGRVKKNAEGGMEEYDSVAGAVGAYSNLDELVVFNPRAILPCFVVIYSGF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4034g00004 425 MobiDBLite consensus disorder prediction 58 92 - -
Vium4034g00004 425 MobiDBLite consensus disorder prediction 1 31 - -
Vium4034g00004 425 SUPERFAMILY ADP-ribosylation 225 424 - -
Vium4034g00004 425 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 92 422 - -
Vium4034g00004 425 MobiDBLite consensus disorder prediction 132 165 - -
Vium4034g00004 425 Gene3D - 224 423 - -
Vium4034g00004 425 MobiDBLite consensus disorder prediction 11 29 - -
Vium4034g00004 425 MobiDBLite consensus disorder prediction 45 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4034g00004 Vium-Chr4034 23319 25809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4034g00004 166 422 C2H2 Transcription Factor Family AT1G75710 54.983 8.72e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4034g00004 - - gmx:100817333 743.421