Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4016g00002 ATGGCAGCAGTGTCAGGGGGTGAGATATGGAAGGCCCACACTGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTTGCCCTTAATGTTGGCGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCTATTCTCGCTCCCCTAGCTTTTATCCGTGAAAAGCGTACAAGGCCACCGATAACTAAACGCCTTCTCATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGAAAGAGTGAACTTGCTAAGATATGA 396 0.4621 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDIIALAILAPLAFIREKRTRPPITKRLLMSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAVQPATPVFTFLLAVMMGKSELAKI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4016g00002 131 PANTHER WAT1-RELATED PROTEIN 14 125 IPR030184 GO:0016020|GO:0022857
Vium4016g00002 131 Pfam EamA-like transporter family 17 126 IPR000620 GO:0016020
Vium4016g00002 131 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4016g00002 Vium-Chr4016 7969 9742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4016g00002 8 128 Nodulin-like Gene Family AT3G45870 77.686 7.62e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4016g00002 - - gmx:100809051 232.646