Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4016g00001 ATGGCAGCAGTGTCAGGGGGTGAGATATGGAAGGCCCACACTGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTTGCCCTTAATGTTGGCGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCTATTCTCGCTCCCCTAGCTTTTATCCGTGAAAAGCGTACAAGGCCACCGATAACTAAACGCCTTCTCATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCTTGTGTTTTAGGTGCTGTACTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGTTTACTGGATCTCGGATTTGATCAATTTCATCTTGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGTTCATCTCCTTTTTATATTCTTCAAATGA 687 0.4381 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDIIALAILAPLAFIREKRTRPPITKRLLMSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVSHSEISAKGQPEPSGWLIGGLLDLGFDQFHLGVLCFIGNCMCMAAFLTIQVHLLFIFFK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4016g00001 228 PANTHER WAT1-RELATED PROTEIN 14 222 IPR030184 GO:0016020|GO:0022857
Vium4016g00001 228 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
Vium4016g00001 228 Pfam EamA-like transporter family 17 136 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4016g00001 Vium-Chr4016 7969 10689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4016g00001 1 223 Nodulin-like Gene Family AT3G45870 65.919 3.80e-95 278