Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3986g00006 ATGGGGTTCACTGGGGAATTGGTAAGAAGTGTCTTCTCCAAAAATCGTTCTGATGGGTCGCATGAAACCAAACAGGTGAAACGCAGTAGTGCTGAAAATAGAAGATGGTTATCTGTTAGGTCGTACTTGTGTGGCGATGAGTTCAATTCAGTCCTTGCAGAGAATGATTCAGCTTCAGTTAAGAGCACTGAAGTCACGGTTTCCCAGTCCATTTTGGAAGACTTGAATGATAAAGGAGACACCGATAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGGCCAAATTCAGACTCCAAATCATTGACTGAGGAAGAAGCAGCAATTCTTATTCAATCAGCATTTAGAGGCTTCCTGTTGAGGCGTCAAAATGGAGAAATCAGATCAGAAACAGGAAAAGAGGAGTTCAATTTAGTAACAGAAAGTCCTGATAGAAAGTCCTTGGGCACATCAGTTGAAGTCCAAACTGCAAACTCCATTGAAGTTTTCTCGGTTGAAGGAGAAGAAAAAGGCCTTTGCCACCGAATTCAGCGCAGGACCAGAACTCAAGTAATAAAGCAAAAGGAAGACTGGGATGACAGCACTGTAAGTAGTTATGTTTCAAAAATGAGGATGCAGAGTAGAATGGAGGCATCAACCAGAAGAGAAAGAGCACTGGCATATGCTTTCTCACAACAGCTAAGAATCTGTTCAAAGAGAAAATTAACAAAACACAACAGCTTGGAGTCAAATATGAGTTGGAGCTGGCTTGAGAGATGGATGGCAACACGCCTTCCAGAGACTTCATCAGTTGAAAGCCATGCCATGAAGCAATATGAACCTTCTAATTGTAATCACAAATTCACAATCATGACAAGATTTTTAGATGCTGCTGGGGAAGAAAAGGAGAGCTGCGGATCAAATGAGGTGCCCCTTCATTTTGATAACTATTCAATCAATTCAGAAGAAGAAAAAGTTAGCTTCAAACCCCACACAGCAAAGACCAACTTCAAGGCTAGGAGAACCGTTTCAAGACGGAAAACAGTGCCAAGTTATCAATTCCATGAAGAGCAGCAGCCAAAGGTAAGCAAGAGAGATGGTTGGGGAAATGCTAGCAAGGATGTTAAGCCAAAACAAAAGCAAGCGGGAAGCAGAACAGAGATTACATTAAGCTCCTCGAAAGCTTCTAATGTGTAA 1176 0.4175 MGFTGELVRSVFSKNRSDGSHETKQVKRSSAENRRWLSVRSYLCGDEFNSVLAENDSASVKSTEVTVSQSILEDLNDKGDTDSEETVENVTQKRPNSDSKSLTEEEAAILIQSAFRGFLLRRQNGEIRSETGKEEFNLVTESPDRKSLGTSVEVQTANSIEVFSVEGEEKGLCHRIQRRTRTQVIKQKEDWDDSTVSSYVSKMRMQSRMEASTRRERALAYAFSQQLRICSKRKLTKHNSLESNMSWSWLERWMATRLPETSSVESHAMKQYEPSNCNHKFTIMTRFLDAAGEEKESCGSNEVPLHFDNYSINSEEEKVSFKPHTAKTNFKARRTVSRRKTVPSYQFHEEQQPKVSKRDGWGNASKDVKPKQKQAGSRTEITLSSSKASNV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3986g00006 391 MobiDBLite consensus disorder prediction 74 103 - -
Vium3986g00006 391 MobiDBLite consensus disorder prediction 323 391 - -
Vium3986g00006 391 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Vium3986g00006 391 MobiDBLite consensus disorder prediction 375 391 - -
Vium3986g00006 391 PANTHER IQ-DOMAIN 5-RELATED 23 356 - -
Vium3986g00006 391 ProSiteProfiles IQ motif profile. 104 133 IPR000048 GO:0005515
Vium3986g00006 391 MobiDBLite consensus disorder prediction 351 374 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3986g00006 1 346 IQD Protein Family AT5G35670 40.943 2.08e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3986g00006 - - gsj:114383427 665.225