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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium3983g00008
ATGGTTTTCACTGCCAATGATTTACAAGAATGGAAAGATTTTCCCAAAGGACTCAAGGTTCTTCTTCTTGAGGAAGACAGCATTTCTGCTGCCGAGATAAGGGCAAAGCTTGAAGCCATGGACTATAATGTTTCTACATTCTGTGATGAGAATGAAGCCTTGTCAGCAATCTCAAGTAGACCTGAAAGCTTCCACATTGCCATAGTAGAGGTGAGTTCGAGCAGTAGCCAGGGAGGTTTCAAATTTCTTGAGAATGCCAAGGACTTGCCAACAATTATGACTTCTAACAACCATTGCCTGAACACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAGCAAACCACTCTCTGAGGACAAACTCAGAAATATCTGGCAGCATGTTGTTCACAAGGCATTCAGTTCTGGGACAAGTATCCTGTGTGAATCGCTTAAACCTGTCAAGGAATCTCTAGTGACTATGTTGCAGCTCCCAACAGACAATGAACAACATGAAAGTAGAGTGTCCATTGATATAGAGAAAGTATCCAGGTTTACTGATAATGATGATGTACTGTCTCCTGGAAATGATAAATATCCAGCTCCTTCAACCCCACAATTGATGCATGGGACAAGATTGTTAGACGATGGTGATTGCCAAGAGCAGACTAATTGCTCCACAGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGTCGAAACTACATGTGACAATATTGCTGAAACTGAAAGTACTCCTCAAGAAAGGAAATCTGATATGACTTTACCTAGGGAGGAAGTGAATTTAGTTGACGCTTCCAAGGTTGAGAGTATTGCCTCTCTACATACACAAAAAAGAAAGGTTCTAAGCAACCCTGACAAAAATACAAAATCTGCAAATAAAGTAGGCGTTCTTAGTGATTCATGCGAGATAAAGCCAAGACGAAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAAATTTGTGAAGGCAGTTGAGCAACTAAGCATTGATCAAGCCATTCCTTCAAGAATATTAGAATTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAGTACAGAATGCATAGGAGACAAATCTTTCCCAAGGAAGAAGATCGGAAATGGTTGAATCAAAGAGAAAGGAGCTATTGTGTTCAAAGACCAATCATGGCCTTTCCTCCATATCATTCTAATCACACCCATACTATGGCTCCTATATATCCTAAGTGGGGACAACCTAGCACTCAAACGGCTGGCATGCATATGTGGAGCACTCCTGGTTATCCCTTGTGGCAGCCTACTGCTGAACATTGGCACTGGAAACCGTTTCCAGGGATGCATGCAGATTCATGGGGCTGTCCAGTGTTACCAGTACCACCTCCTCAAGCTCCTTTTCCCTACTCTAAGAATATGCCTGCGTTGCTCAATGCTGATGCAACAGGTCACACTTTTACCATGCCACAAAGTTCCTTAGAGAATTATCCGGCAGAGGAGGTTGTTGACAAGGTTGTGAAAGAGGCAGTAAGCAAACCATGGCTACCCTTGCCTTTGGGCCTGAAACCCCCTTCCACAGACAGTGTGTTGACTGAGTTATCAAGACAAGGCATTTGCAGCATCCCTCCTAGGAGCAGCAAGGGTTGA
1662
0.4332
MVFTANDLQEWKDFPKGLKVLLLEEDSISAAEIRAKLEAMDYNVSTFCDENEALSAISSRPESFHIAIVEVSSSSSQGGFKFLENAKDLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFSSGTSILCESLKPVKESLVTMLQLPTDNEQHESRVSIDIEKVSRFTDNDDVLSPGNDKYPAPSTPQLMHGTRLLDDGDCQEQTNCSTEKESGEHDGESKSVETTCDNIAETESTPQERKSDMTLPREEVNLVDASKVESIASLHTQKRKVLSNPDKNTKSANKVGVLSDSCEIKPRRKKMKVDWTPELHKKFVKAVEQLSIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRQIFPKEEDRKWLNQRERSYCVQRPIMAFPPYHSNHTHTMAPIYPKWGQPSTQTAGMHMWSTPGYPLWQPTAEHWHWKPFPGMHADSWGCPVLPVPPPQAPFPYSKNMPALLNADATGHTFTMPQSSLENYPAEEVVDKVVKEAVSKPWLPLPLGLKPPSTDSVLTELSRQGICSIPPRSSKG
553
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium3983g00008
553
MobiDBLite
consensus disorder prediction
183
259
-
-
Vium3983g00008
553
SMART
REC_2
18
128
IPR001789
GO:0000160
Vium3983g00008
553
FunFam
Two-component response regulator
311
373
-
-
Vium3983g00008
553
Gene3D
-
18
139
-
-
Vium3983g00008
553
Pfam
Response regulator receiver domain
20
127
IPR001789
GO:0000160
Vium3983g00008
553
SUPERFAMILY
Homeodomain-like
314
372
IPR009057
-
Vium3983g00008
553
ProSiteProfiles
Response regulatory domain profile.
19
132
IPR001789
GO:0000160
Vium3983g00008
553
SUPERFAMILY
CheY-like
16
134
IPR011006
-
Vium3983g00008
553
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
312
371
IPR017930
-
Vium3983g00008
553
PANTHER
TRANSCRIPTION ACTIVATOR GLK1
1
549
IPR044825
GO:0003700|GO:0045893
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium3983g00008
Vium-Chr3983
75598
81742
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium3983g00008
1
550
Response Regulator Gene Family
AT4G18020
49.653
3.40e-142
419
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GARP-ARR-B
Vium3983g00008
Response_reg
3.4e-08
CL0304
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium3983g00008
-
-
gmx:100777535
921.768
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