Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3948g00001 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTCATGATGAGGCACTGAGTAATAAAGAATCTCCTGGACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGGATGCTTTCAGAACCCATACCAAATGGTTTTTACTCTGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTAATGCTTTGAGTGGAGAGGGTTTTAAGACTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTGAAGCAATTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATGTTGAAAGTCCAGCAAAAGCTGTGCTAGATGAAACATCTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTTGTGCTGGGTTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCGACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGGTTAGATCCTATCAAGCTTAAGAACTGTTATTATAGCTTGGGCTTGATTGCACTTTTGTCCCTTTAA 954 0.4067 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSHDEALSNKESPGHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELNALSGEGFKTDVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAVLDETSHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVLGLPNDGVTECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSERLDPIKLKNCYYSLGLIALLSL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3948g00001 317 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 183 274 - -
Vium3948g00001 317 MobiDBLite consensus disorder prediction 1 20 - -
Vium3948g00001 317 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3948g00001 Vium-Chr3948 12751 18016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3948g00001 1 298 MAP Kinase Kinase Kinase AT3G58640 68.456 9.62e-142 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3948g00001 - - vum:124836254 628.246