Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3936g00001 ATGGCTTCCCTTGATGGTCAGAAAACTAATGAAACTTCATCGAATCATGTTGAGATTCCTGTCGGTGTGGAGCCAAAAGCAAACCGAGAAATCGTTGAAGAGAGAAACATAGACTATTCCCAGAGGGCGAATTGGGTGCGAGCAGCAGTGTTAGGAGCGAATGAAGGTTTAGTCTCGGTTGCATCATTGATGATGGGTGTTGGAGCTGTTAAGGAGCAGATGACAGCGATGCTTCTTGCTGGTTTTGCAGGGTTAATTGCCGGGGCATGCAGCATGGCGATAGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAAATAGCTCAAATGAAAAGAGAGAGAGAAAAGAAGAGTATTAGTGATGGAGTGAGTGAAGAAGCTGAAAGGGAAAAGTTGCCAAATCCATTTCAGGCTGCCGTAGCATCGGCTCTAGCATTTTCTGTGGGTGCAGTGGTGCCACTGCTGTCTGCTGCATTCATAAAAAACCATAAAATAAGACTTGGTGTTGTTGTTACAGTGGCTAGTCTGACATTGGTGGTGTTTGGTGGGTTAGGAGCAGTGCTTGGAAAAACTCCAATCACAAAATCTTGCCTTAGGGTGCTCATTGGAGGATGGATGGCTATGACTGTAACATTTGGCTTCACCAAGTTATTTTCCTTTGCTGGGATTTGA 675 0.4489 MASLDGQKTNETSSNHVEIPVGVEPKANREIVEERNIDYSQRANWVRAAVLGANEGLVSVASLMMGVGAVKEQMTAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQMKREREKKSISDGVSEEAEREKLPNPFQAAVASALAFSVGAVVPLLSAAFIKNHKIRLGVVVTVASLTLVVFGGLGAVLGKTPITKSCLRVLIGGWMAMTVTFGFTKLFSFAGI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3936g00001 224 CDD Nodulin-21 45 193 - -
Vium3936g00001 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 219 IPR008217 GO:0005384|GO:0030026
Vium3936g00001 224 Pfam VIT family 46 121 IPR008217 GO:0005384|GO:0030026
Vium3936g00001 224 Pfam VIT family 129 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3936g00001 Vium-Chr3936 48 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3936g00001 11 224 Nodulin-like Gene Family AT3G43660 60.280 2.27e-89 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3936g00001 K22736 - gmx:100817158 312.768